RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MCTP2Q6DN12 878 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 MTHFD1LQ6UB35 978 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 ERMP1Q7Z2K6 904 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 COLGALT1Q8NBJ5 622 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 VN1R2Q8NFZ6 395 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 MRPS27Q92552 414 aaKnown RBP10.29□□□□□ -0.76
SMG6-218ENST00000575454 CASP10Q92851 521 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 ADAM2Q99965 735 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 TCF25Q9BQ70 676 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 MTA3Q9BTC8 594 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 TMX1Q9H3N1 280 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 ENTPD7Q9NQZ7 604 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 TYW1Q9NV66 732 aaKnown RBP10.29□□□□□ -0.76
SMG6-218ENST00000575454 TMEM161AQ9NX61 479 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 PKD2L1Q9P0L9 805 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 PCDHGC5Q9Y5F6 944 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 NFASCO94856 1347 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 NCOR2Q9Y618 2525 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 FRYLO94915 3013 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 TECTAO75443 2155 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 C9IYK1 514 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 HBP1O60381 514 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 CYP21A2P08686 494 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 CALM1P0DP23 149 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 CALM2P0DP24 149 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 CALM3P0DP25 149 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 IBSPP21815 317 aaPredicted RBP10.28□□□□□ -0.76
SMG6-218ENST00000575454 KLRC1P26715 233 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 GATMP50440 423 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 ACTR2P61160 394 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 FAM189BP81408 668 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 TMEM266Q2M3C6 531 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 FAM102BQ5T8I3 360 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 FAM160B1Q5W0V3 765 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 SYCE2Q6PIF2 218 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 IGDCC4Q8TDY8 1250 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 ZBTB10Q96DT7 871 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 PCYT2Q99447 389 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 TMEM117Q9H0C3 514 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 ADAM7Q9H2U9 754 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 ERVK-5Q9HDB9 667 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 TSHZ2Q9NRE2 1034 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 KCNH7Q9NS40 1196 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 PCDHA6Q9UN73 950 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 ST3GAL5Q9UNP4 418 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 GINS2Q9Y248 185 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 PCDHA8Q9Y5H6 950 aa10.28□□□□□ -0.76
SMG6-218ENST00000575454 PTPRSQ13332 1948 aa10.27□□□□□ -0.76
SMG6-218ENST00000575454 CARNS1A5YM72 827 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 PRR23AA6NEV1 266 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 E7EWF7 191 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 FOSP01100 380 aaPredicted RBP10.27□□□□□ -0.77
SMG6-218ENST00000575454 MTHFRP42898 656 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 CLCN5P51795 746 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 CRYBB1P53674 252 aaPredicted RBP10.27□□□□□ -0.77
SMG6-218ENST00000575454 RBM10P98175 930 aaKnown RBP10.27□□□□□ -0.77
SMG6-218ENST00000575454 ZNF484Q5JVG2 852 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 PLPP4Q5VZY2 271 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
SMG6-218ENST00000575454 LLGL2Q6P1M3 1020 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 CASC1Q6TDU7 716 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 TMC7Q7Z402 723 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 KIAA0319LQ8IZA0 1049 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 ZNF654Q8IZM8 581 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 ABI1Q8IZP0 508 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 LRRC43Q8N309 656 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 PLCD3Q8N3E9 789 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 NKD2Q969F2 451 aaPredicted RBP10.27□□□□□ -0.77
SMG6-218ENST00000575454 ZNF558Q96NG5 402 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 MXRA8Q9BRK3 442 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 MFSD1Q9H3U5 465 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 SENP2Q9HC62 589 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 NOC2LQ9Y3T9 749 aaKnown RBP10.27□□□□□ -0.77
SMG6-218ENST00000575454 CHD6Q8TD26 2715 aa10.27□□□□□ -0.77
SMG6-218ENST00000575454 MICAL3Q7RTP6 2002 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 CCDC69A6NI79 296 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 BACH1O14867 736 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 MGEA5O60502 916 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 ATG7O95352 703 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 PDE4AP27815 886 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 SMC1AQ14683 1233 aaKnown RBP10.26□□□□□ -0.77
SMG6-218ENST00000575454 CEP55Q53EZ4 464 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 ATAT1Q5SQI0 421 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 KCNT2Q6UVM3 1135 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 NFXL1Q6ZNB6 911 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 ASCL5Q7RTU5 278 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 ZDHHC14Q8IZN3 488 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 SRBD1Q8N5C6 995 aaKnown RBP10.26□□□□□ -0.77
SMG6-218ENST00000575454 MRPL43Q8N983 215 aaKnown RBP10.26□□□□□ -0.77
SMG6-218ENST00000575454 TMEM87AQ8NBN3 555 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 TRAPPC12Q8WVT3 735 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 RSPH1Q8WYR4 309 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 CWH43Q9H720 699 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 DZANK1Q9NVP4 752 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 SPG21Q9NZD8 308 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 USTQ9Y2C2 406 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 TRIP12Q14669 1992 aaPredicted RBP10.26□□□□□ -0.77
SMG6-218ENST00000575454 COL1A2P08123 1366 aa10.26□□□□□ -0.77
SMG6-218ENST00000575454 MYO7AQ13402 2215 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms