RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 CAGE1Q8TC20 777 aa17.56■□□□□ 0.4
CCNE1-204ENST00000574121 PPP1R13LQ8WUF5 828 aa17.56■□□□□ 0.4
CCNE1-204ENST00000574121 LEO1Q8WVC0 666 aaPredicted RBP17.56■□□□□ 0.4
CCNE1-204ENST00000574121 JPH2Q9BR39 696 aaPredicted RBP17.56■□□□□ 0.4
CCNE1-204ENST00000574121 TMEM39AQ9NV64 488 aa17.56■□□□□ 0.4
CCNE1-204ENST00000574121 PRKAG2Q9UGJ0 569 aa17.56■□□□□ 0.4
CCNE1-204ENST00000574121 PITPNM1O00562 1244 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 C22orf31O95567 290 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 KLRC1P26715 233 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 CDC25AP30304 524 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 ME1P48163 572 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 IGBP1P78318 339 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 ZNF200P98182 395 aaPredicted RBP17.55■□□□□ 0.4
CCNE1-204ENST00000574121 TBC1D8BQ0IIM8 1120 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 BFSP2Q13515 415 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 POTEGQ6S5H5 508 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 MTHFD1LQ6UB35 978 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 TRMT1LQ7Z2T5 733 aaKnown RBP17.55■□□□□ 0.4
CCNE1-204ENST00000574121 RETREG2Q8NC44 543 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 CALML4Q96GE6 196 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 CDK5RAP3Q96JB5 506 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 CEP170P1Q96L14 293 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 CLIC6Q96NY7 704 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 CEP89Q96ST8 783 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 KIAA1024Q9UPX6 916 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 PCDHA2Q9Y5H9 948 aa17.55■□□□□ 0.4
CCNE1-204ENST00000574121 MYH9P35579 1960 aaKnown RBP17.55■□□□□ 0.4
CCNE1-204ENST00000574121 SMIM35A0A1B0GVV1 85 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 GAS2O43903 313 aaKnown RBP17.54■□□□□ 0.4
CCNE1-204ENST00000574121 RFC5P40937 340 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 RARRES1P49788 294 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 MTERF2Q49AM1 385 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 AXDND1Q5T1B0 1012 aaPredicted RBP17.54■□□□□ 0.4
CCNE1-204ENST00000574121 RSPH3Q86UC2 560 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 ZNF710Q8N1W2 664 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 TRAPPC12Q8WVT3 735 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 SLC7A3Q8WY07 619 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 SYMPKQ92797 1274 aaKnown RBP17.54■□□□□ 0.4
CCNE1-204ENST00000574121 CCDC43Q96MW1 224 aaKnown RBP17.54■□□□□ 0.4
CCNE1-204ENST00000574121 NOC4LQ9BVI4 516 aaKnown RBP17.54■□□□□ 0.4
CCNE1-204ENST00000574121 HIPK3Q9H422 1215 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 DDX19AQ9NUU7 478 aaKnown RBP17.54■□□□□ 0.4
CCNE1-204ENST00000574121 CCDC39Q9UFE4 941 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 PCDHA7Q9UN72 937 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 DNM3Q9UQ16 869 aa17.54■□□□□ 0.4
CCNE1-204ENST00000574121 IGKV6-21A0A0C4DH24 114 aa17.53■□□□□ 0.4
CCNE1-204ENST00000574121 MAFO75444 373 aaPredicted RBP17.53■□□□□ 0.4
CCNE1-204ENST00000574121 CYP2C9P11712 490 aa17.53■□□□□ 0.4
CCNE1-204ENST00000574121 TMOD1P28289 359 aa17.53■□□□□ 0.4
CCNE1-204ENST00000574121 GRB10Q13322 594 aa17.53■□□□□ 0.4
CCNE1-204ENST00000574121 ECM1Q16610 540 aa17.53■□□□□ 0.4
CCNE1-204ENST00000574121 TMEM119Q4V9L6 283 aa17.53■□□□□ 0.4
CCNE1-204ENST00000574121 XKR9Q5GH70 373 aa17.53■□□□□ 0.4
CCNE1-204ENST00000574121 PLA2G4FQ68DD2 849 aa17.53■□□□□ 0.4
CCNE1-204ENST00000574121 NME8Q8N427 588 aa17.53■□□□□ 0.4
CCNE1-204ENST00000574121 PIGOQ8TEQ8 1089 aa17.53■□□□□ 0.4
CCNE1-204ENST00000574121 DHX38Q92620 1227 aaKnown RBP17.53■□□□□ 0.4
CCNE1-204ENST00000574121 DHX33Q9H6R0 707 aaKnown RBP17.53■□□□□ 0.4
CCNE1-204ENST00000574121 PRDM5Q9NQX1 630 aaPredicted RBP17.53■□□□□ 0.4
CCNE1-204ENST00000574121 TMEM150BA6NC51 233 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 TRIM43BA6NCK2 446 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 ZBTB39O15060 712 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 DGAT1O75907 488 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 PARNO95453 639 aaKnown RBP17.52■□□□□ 0.4
CCNE1-204ENST00000574121 EYA4O95677 639 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 POLGP54098 1239 aaPredicted RBP17.52■□□□□ 0.4
CCNE1-204ENST00000574121 NPEPPSP55786 919 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 CSPP1Q1MSJ5 1256 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 TRIM71Q2Q1W2 868 aaKnown RBP17.52■□□□□ 0.4
CCNE1-204ENST00000574121 ADALQ6DHV7 355 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 LINC01465Q8N7H1 131 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 RASSF8Q8NHQ8 419 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 TRIM43Q96BQ3 446 aaPredicted RBP17.52■□□□□ 0.4
CCNE1-204ENST00000574121 EPSTI1Q96J88 318 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 CHAMP1Q96JM3 812 aa17.52■□□□□ 0.4
CCNE1-204ENST00000574121 WDR81Q562E7 1941 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 ALPK3Q96L96 1907 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 TIMP1P01033 207 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 RAG1P15918 1043 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 DNM2P50570 870 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 SPECC1Q5M775 1068 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 EFCAB12Q6NXP0 572 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 SHC4Q6S5L8 630 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 RUFY4Q6ZNE9 571 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 CCDC73Q6ZRK6 1079 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 USP49Q70CQ1 688 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 SH3RF1Q7Z6J0 888 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 PNMA5Q96PV4 448 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 MAP7D2Q96T17 732 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 BHMT2Q9H2M3 363 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 STK17AQ9UEE5 414 aa17.51■□□□□ 0.39
CCNE1-204ENST00000574121 ARHGEF35A5YM69 484 aa17.5■□□□□ 0.39
CCNE1-204ENST00000574121 CKBP12277 381 aa17.5■□□□□ 0.39
CCNE1-204ENST00000574121 SELPP16109 830 aa17.5■□□□□ 0.39
CCNE1-204ENST00000574121 PLCG1P19174 1290 aa17.5■□□□□ 0.39
CCNE1-204ENST00000574121 THPOP40225 353 aa17.5■□□□□ 0.39
CCNE1-204ENST00000574121 CDC42EP1Q00587 391 aa17.5■□□□□ 0.39
CCNE1-204ENST00000574121 KARSQ15046 597 aaKnown RBP17.5■□□□□ 0.39
CCNE1-204ENST00000574121 ZRSR1Q15695 479 aaKnown RBP17.5■□□□□ 0.39
CCNE1-204ENST00000574121 RESP18Q5W5W9 173 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms