RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 KIAA1755Q5JYT7 1200 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 CCDC174Q6PII3 467 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 IFT20Q8IY31 132 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 MYCT1Q8N699 235 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 RUFY1Q96T51 708 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 RABEP2Q9H5N1 569 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 RRP15Q9Y3B9 282 aaKnown RBP12.28□□□□□ -0.44
RPAIN-212ENST00000573126 NRXN2Q9P2S2 1712 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 SMCHD1A6NHR9 2005 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 ANKRD65E5RJM6 399 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 TGFB1I1O43294 461 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 EYA4O95677 639 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 RPL13P26373 211 aaKnown RBP12.27□□□□□ -0.44
RPAIN-212ENST00000573126 MMP14P50281 582 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 STAT2P52630 851 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 COG2Q14746 738 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 GLE1Q53GS7 698 aaKnown RBP12.27□□□□□ -0.44
RPAIN-212ENST00000573126 TTC19Q6DKK2 380 aaPredicted RBP12.27□□□□□ -0.44
RPAIN-212ENST00000573126 GBP6Q6ZN66 633 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 SRLQ86TD4 932 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 C10orf67Q8IYJ2 551 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 ACER1Q8TDN7 264 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 ARL8AQ96BM9 186 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 DYDC2Q96IM9 177 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 SIX2Q9NPC8 291 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 SERPINA10Q9UK55 444 aa12.27□□□□□ -0.44
RPAIN-212ENST00000573126 HSF2BPO75031 334 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 SLITRK3O94933 977 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 FAM13AO94988 1023 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 RPS6KA1Q15418 735 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 ZYXQ15942 572 aaKnown RBP12.27□□□□□ -0.45
RPAIN-212ENST00000573126 LRCH2Q5VUJ6 765 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 MCTP2Q6DN12 878 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 FBXO41Q8TF61 875 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 TAF4BQ92750 862 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 CAVIN3Q969G5 261 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 HSD17B14Q9BPX1 270 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 MRIQ9BWK5 157 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-212ENST00000573126 UTRNP46939 3433 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 SCN9AQ15858 1988 aa12.27□□□□□ -0.45
RPAIN-212ENST00000573126 TCP10L2B9ZVM9 353 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 RAD51CO43502 376 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 GFPT2O94808 682 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 CHRNA5P30532 468 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 HDLBPQ00341 1268 aaKnown RBP12.26□□□□□ -0.45
RPAIN-212ENST00000573126 BMT2Q1RMZ1 405 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 TTMPQ5BVD1 217 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 KCTD16Q68DU8 428 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 OTOP1Q7RTM1 612 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 USP38Q8NB14 1042 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 PROCA1Q8NCQ7 364 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-212ENST00000573126 CCDC43Q96MW1 224 aaKnown RBP12.26□□□□□ -0.45
RPAIN-212ENST00000573126 ZIM3Q96PE6 472 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 SH3GL2Q99962 352 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 POLR3CQ9BUI4 534 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-212ENST00000573126 METTL14Q9HCE5 456 aaKnown RBP12.26□□□□□ -0.45
RPAIN-212ENST00000573126 GDF3Q9NR23 364 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 BZW2Q9Y6E2 419 aaKnown RBP12.26□□□□□ -0.45
RPAIN-212ENST00000573126 CEP104O60308 925 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 FLOT1O75955 427 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 TNFRSF8P28908 595 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 HSPA1LP34931 641 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 BTNL9Q6UXG8 535 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 SH2D3CQ8N5H7 860 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 CASKIN2Q8WXE0 1202 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 AP1M1Q9BXS5 423 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.26□□□□□ -0.452e-7■■□□□ 11.6
RPAIN-212ENST00000573126 OLFML3Q9NRN5 406 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 ZMYM2Q9UBW7 1377 aa12.26□□□□□ -0.45
RPAIN-212ENST00000573126 CLRN2A0PK11 232 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 TMCO5BA8MYB1 307 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 KIF4AO95239 1232 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 CYP3A4P08684 503 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 PPFIA1Q13136 1202 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 FAM186BQ8IYM0 893 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 LRRC57Q8N9N7 239 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 WRAP73Q9P2S5 460 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-212ENST00000573126 FEZ2Q9UHY8 353 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-212ENST00000573126 COL11A2P13942 1736 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-212ENST00000573126 PIK3CDO00329 1044 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 SLC16A3O15427 465 aaKnown RBP12.25□□□□□ -0.45
RPAIN-212ENST00000573126 OPA1O60313 960 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 CYP2J2P51589 502 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 JAM2P57087 298 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 PAK2Q13177 524 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 C1orf186Q6ZWK4 172 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 U2AF1L4Q8WU68 220 aaKnown RBP12.25□□□□□ -0.45
RPAIN-212ENST00000573126 PARVGQ9HBI0 331 aa12.25□□□□□ -0.45
RPAIN-212ENST00000573126 DDX3XO00571 662 aaKnown RBP eCLIP12.24□□□□□ -0.452e-11■■■■■ 31.8
RPAIN-212ENST00000573126 EVI5O60447 810 aa12.24□□□□□ -0.45
RPAIN-212ENST00000573126 GAS7O60861 476 aa12.24□□□□□ -0.45
RPAIN-212ENST00000573126 SHOX2O60902 331 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-212ENST00000573126 PSMD10O75832 226 aa12.24□□□□□ -0.45
RPAIN-212ENST00000573126 TRIM49P0CI25 452 aa12.24□□□□□ -0.45
RPAIN-212ENST00000573126 TRIM49CP0CI26 452 aa12.24□□□□□ -0.45
RPAIN-212ENST00000573126 PRKCIP41743 596 aa12.24□□□□□ -0.45
RPAIN-212ENST00000573126 IRAK1P51617 712 aa12.24□□□□□ -0.45
RPAIN-212ENST00000573126 C10orf76Q5T2E6 689 aa12.24□□□□□ -0.45
RPAIN-212ENST00000573126 ALS2CLQ60I27 953 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms