RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 KAT6AQ92794 2004 aa20.54■□□□□ 0.88
CHD3-214ENST00000572579 ADGRA3Q8IWK6 1321 aa20.53■□□□□ 0.88
CHD3-214ENST00000572579 GPR32O75388 356 aa20.53■□□□□ 0.88
CHD3-214ENST00000572579 RPLP2P05387 115 aaKnown RBP20.53■□□□□ 0.88
CHD3-214ENST00000572579 SETQ01105 290 aaPredicted RBP20.53■□□□□ 0.88
CHD3-214ENST00000572579 COL19A1Q14993 1142 aa20.53■□□□□ 0.88
CHD3-214ENST00000572579 UGCGQ16739 394 aa20.53■□□□□ 0.88
CHD3-214ENST00000572579 LINC01465Q8N7H1 131 aa20.53■□□□□ 0.88
CHD3-214ENST00000572579 BANK1Q8NDB2 785 aa20.53■□□□□ 0.88
CHD3-214ENST00000572579 TNPO1Q92973 898 aaKnown RBP20.53■□□□□ 0.88
CHD3-214ENST00000572579 PPP1R16BQ96T49 567 aa20.53■□□□□ 0.88
CHD3-214ENST00000572579 SH3GLB2Q9NR46 395 aa20.53■□□□□ 0.88
CHD3-214ENST00000572579 MRPL42Q9Y6G3 142 aaKnown RBP20.53■□□□□ 0.88
CHD3-214ENST00000572579 KCNA5P22460 613 aa20.52■□□□□ 0.88
CHD3-214ENST00000572579 CTNNB1P35222 781 aa20.52■□□□□ 0.88
CHD3-214ENST00000572579 USP11P51784 963 aa20.52■□□□□ 0.88
CHD3-214ENST00000572579 NLRP5P59047 1200 aa20.52■□□□□ 0.88
CHD3-214ENST00000572579 STK3Q13188 491 aa20.52■□□□□ 0.88
CHD3-214ENST00000572579 SMAP1Q8IYB5 467 aaPredicted RBP20.52■□□□□ 0.88
CHD3-214ENST00000572579 BICD2Q8TD16 824 aa20.52■□□□□ 0.88
CHD3-214ENST00000572579 TBCKQ8TEA7 893 aa20.52■□□□□ 0.88
CHD3-214ENST00000572579 BBXQ8WY36 941 aaPredicted RBP20.52■□□□□ 0.88
CHD3-214ENST00000572579 SLC5A5Q92911 643 aa20.52■□□□□ 0.88
CHD3-214ENST00000572579 GINS2Q9Y248 185 aa20.52■□□□□ 0.88
CHD3-214ENST00000572579 COL1A2P08123 1366 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 STBD1O95210 358 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 VTNP04004 478 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 DNAJB1P25685 340 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 SSRP1Q08945 709 aaKnown RBP20.51■□□□□ 0.87
CHD3-214ENST00000572579 PAK2Q13177 524 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 BTG3Q14201 252 aaPredicted RBP20.51■□□□□ 0.87
CHD3-214ENST00000572579 PTPROQ16827 1216 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 KIZQ2M2Z5 673 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 LEXMQ3ZCV2 418 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 B3GNT9Q6UX72 402 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 CCDC148Q8NFR7 591 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 NEK9Q8TD19 979 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 FTHL17Q9BXU8 183 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 UNC45AQ9H3U1 944 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 RAPGEFL1Q9UHV5 662 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 PCDHA4Q9UN74 947 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 ST3GAL5Q9UNP4 418 aa20.51■□□□□ 0.87
CHD3-214ENST00000572579 CYP3A7-CYP3A51PA0A087WV96 503 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 M0QZ92 97 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 TDP2O95551 362 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 RB1P06400 928 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 PSAPP07602 524 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 CYP3A7P24462 503 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 LTBRP36941 435 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 SCRN1Q12765 414 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 NFX1Q12986 1120 aaKnown RBP20.5■□□□□ 0.87
CHD3-214ENST00000572579 FAM228AQ86W67 206 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 NPAS4Q8IUM7 802 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 CKAP2LQ8IYA6 745 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 OSMRQ99650 979 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 ADAMTS10Q9H324 1103 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 EPHX3Q9H6B9 360 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 ALG13Q9NP73 1137 aaKnown RBP20.5■□□□□ 0.87
CHD3-214ENST00000572579 DISC1Q9NRI5 854 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 GJB4Q9NTQ9 266 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 PDRG1Q9NUG6 133 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 PLAGL2Q9UPG8 496 aa20.5■□□□□ 0.87
CHD3-214ENST00000572579 H3BQ06 376 aaPredicted RBP20.49■□□□□ 0.87
CHD3-214ENST00000572579 PSMD10O75832 226 aa20.49■□□□□ 0.87
CHD3-214ENST00000572579 GTF2F1P35269 517 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHD3-214ENST00000572579 CLCN3P51790 818 aa20.49■□□□□ 0.87
CHD3-214ENST00000572579 Q4G0T1 1027 aa20.49■□□□□ 0.87
CHD3-214ENST00000572579 MBOAT7Q96N66 472 aa20.49■□□□□ 0.87
CHD3-214ENST00000572579 CEP89Q96ST8 783 aa20.49■□□□□ 0.87
CHD3-214ENST00000572579 RIT2Q99578 217 aa20.49■□□□□ 0.87
CHD3-214ENST00000572579 TPCN1Q9ULQ1 816 aa20.49■□□□□ 0.87
CHD3-214ENST00000572579 KCNJ14Q9UNX9 436 aa20.49■□□□□ 0.87
CHD3-214ENST00000572579 TMEM150BA6NC51 233 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 C9IYK1 514 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 RPS6KA5O75582 802 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 DEXIO95424 95 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 CTDNEP1O95476 244 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 IL9P15248 144 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 CRYBB1P53674 252 aaPredicted RBP20.48■□□□□ 0.87
CHD3-214ENST00000572579 FAM189BP81408 668 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 HYAL1Q12794 435 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 DSC3Q14574 896 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 PAN2Q504Q3 1202 aaKnown RBP20.48■□□□□ 0.87
CHD3-214ENST00000572579 FAM102BQ5T8I3 360 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 CMTR2Q8IYT2 770 aaKnown RBP20.48■□□□□ 0.87
CHD3-214ENST00000572579 BLIDQ8IZY5 108 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 LRRC71Q8N4P6 559 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 METTL13Q8N6R0 699 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 DAGLBQ8NCG7 672 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 SPPL3Q8TCT6 385 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 ZNF668Q96K58 619 aaPredicted RBP20.48■□□□□ 0.87
CHD3-214ENST00000572579 ADAM2Q99965 735 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 NSUN3Q9H649 340 aaKnown RBP20.48■□□□□ 0.87
CHD3-214ENST00000572579 RGS18Q9NS28 235 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 HCSTQ9UBK5 93 aa20.48■□□□□ 0.87
CHD3-214ENST00000572579 WDR64B1ANS9 1081 aa20.47■□□□□ 0.87
CHD3-214ENST00000572579 CHMP2AO43633 222 aa20.47■□□□□ 0.87
CHD3-214ENST00000572579 ITGB1P05556 798 aa20.47■□□□□ 0.87
CHD3-214ENST00000572579 SARSP49591 514 aaKnown RBP20.47■□□□□ 0.87
CHD3-214ENST00000572579 DLX2Q07687 328 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms