RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 ARVCFO00192 962 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 POLR2DO15514 142 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 PQBP1O60828 265 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 PLA2G4BP0C869 781 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 COL6A1P12109 1028 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 XRCC6P12956 609 aaKnown RBP eCLIP10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 SYKP43405 635 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 MNX1P50219 401 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 POLGP54098 1239 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 UBE2HP62256 183 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 PTPN11Q06124 597 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 TBC1D8BQ0IIM8 1120 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 DHX8Q14562 1220 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 ECM1Q16610 540 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 TMEM119Q4V9L6 283 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 HYIQ5T013 277 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 ANO5Q75V66 913 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 CEP57L1Q8IYX8 460 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 LMBR1Q8WVP7 490 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 TRAPPC12Q8WVT3 735 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 SLC7A3Q8WY07 619 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 SH2D3AQ9BRG2 576 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 NIFKQ9BYG3 293 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 CYP26B1Q9NR63 512 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 BMP2KQ9NSY1 1161 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 STK17AQ9UEE5 414 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 GTF2IRD1Q9UHL9 959 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 TUBE1Q9UJT0 475 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 DBR1Q9UK59 544 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 MROH7Q68CQ1 1323 aa10.53□□□□□ -0.72
NPLOC4-208ENST00000572351 MYH7BA7E2Y1 1941 aa10.52□□□□□ -0.72
NPLOC4-208ENST00000572351 COL1A2P08123 1366 aa10.52□□□□□ -0.72
NPLOC4-208ENST00000572351 ZBTB39O15060 712 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 TLR3O15455 904 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 GADD45BO75293 160 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 EYA4O95677 639 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 KRT18P05783 430 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 RARRES1P49788 294 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 NDUFA8P51970 172 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 NPEPPSP55786 919 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 PTGISQ16647 500 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 PADI6Q6TGC4 694 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 SLC39A5Q6ZMH5 540 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 SESTD1Q86VW0 696 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 EXOC8Q8IYI6 725 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 METTL13Q8N6R0 699 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 RETREG2Q8NC44 543 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 RAD54LQ92698 747 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 CCDC34Q96HJ3 373 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 JPH2Q9BR39 696 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 CUEDC2Q9H467 287 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 ATP11BQ9Y2G3 1177 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 PPME1Q9Y570 386 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 GRIN2DO15399 1336 aa10.52□□□□□ -0.73
NPLOC4-208ENST00000572351 A0A087X0B3 334 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 DCDC2CA8MYV0 355 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 MAGEB2O15479 319 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 USO1O60763 962 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 DGAT1O75907 488 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 STBD1O95210 358 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 CYP2C9P11712 490 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 KLRC1P26715 233 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 TMOD1P28289 359 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 RFC5P40937 340 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 RTP1P59025 263 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 FAM160A1Q05DH4 1040 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 TRIM60Q495X7 471 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 GDF6Q6KF10 455 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 TAF2Q6P1X5 1199 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 MTHFD1LQ6UB35 978 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 SV2BQ7L1I2 683 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 MAEAQ7L5Y9 396 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 KCNK18Q7Z418 384 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 CNNM3Q8NE01 707 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 LARP4BQ92615 738 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 MAP7D2Q96T17 732 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 MTRQ99707 1265 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 LRRC27Q9C0I9 530 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 FAM49AQ9H0Q0 323 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 TRPV6Q9H1D0 765 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 GOLPH3LQ9H4A5 285 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 SUGCTQ9HAC7 445 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 ATP6V0A4Q9HBG4 840 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 TRMT13Q9NUP7 481 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 HPSEQ9Y251 543 aa10.51□□□□□ -0.73
NPLOC4-208ENST00000572351 MCM3APO60318 1980 aa10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 HTTP42858 3142 aa10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 FAM237AA0A1B0GTK4 181 aa10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 TREHO43280 583 aa10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 B4GALT4O60513 344 aa10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 KINO60870 393 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 MAFO75444 373 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 C22orf31O95567 290 aa10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 DNM2P50570 870 aa10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 ZNF200P98182 395 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 AMPD3Q01432 767 aa10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 TLE2Q04725 743 aa10.5□□□□□ -0.73
NPLOC4-208ENST00000572351 MCM6Q14566 821 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms