RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 KIAA0319LQ8IZA0 1049 aa12.54□□□□□ -0.4
SMG6-206ENST00000570668 APBB2Q92870 758 aa12.54□□□□□ -0.4
SMG6-206ENST00000570668 FAM161BQ96MY7 647 aa12.54□□□□□ -0.4
SMG6-206ENST00000570668 IFIH1Q9BYX4 1025 aaKnown RBP12.54□□□□□ -0.4
SMG6-206ENST00000570668 ZNF576Q9H609 170 aa12.54□□□□□ -0.4
SMG6-206ENST00000570668 YBX2Q9Y2T7 364 aaKnown RBP12.54□□□□□ -0.4
SMG6-206ENST00000570668 KIF3AQ9Y496 699 aa12.54□□□□□ -0.4
SMG6-206ENST00000570668 SQORQ9Y6N5 450 aa12.54□□□□□ -0.4
SMG6-206ENST00000570668 GBF1Q92538 1859 aa12.54□□□□□ -0.4
SMG6-206ENST00000570668 KDM3AQ9Y4C1 1321 aa12.54□□□□□ -0.4
SMG6-206ENST00000570668 RBAK-RBAKDNI3L0D1 243 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 MAGEB2O15479 319 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 MARCH6O60337 910 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 NEMFO60524 1076 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 STBD1O95210 358 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 BAG4O95429 457 aaKnown RBP12.53□□□□□ -0.4
SMG6-206ENST00000570668 GHRP10912 638 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 DEFB103AP81534 67 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 SPIRE1Q08AE8 756 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 LPIN1Q14693 890 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 TARBP2Q15633 366 aaKnown RBP12.53□□□□□ -0.4
SMG6-206ENST00000570668 XKR3Q5GH77 459 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 USP38Q8NB14 1042 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 NIFKQ9BYG3 293 aaKnown RBP12.53□□□□□ -0.4
SMG6-206ENST00000570668 STXBP5LQ9Y2K9 1186 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 TRPV2Q9Y5S1 764 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 MICAL3Q7RTP6 2002 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 SIP14410 1827 aa12.53□□□□□ -0.4
SMG6-206ENST00000570668 PTPRSQ13332 1948 aa12.52□□□□□ -0.4
SMG6-206ENST00000570668 KIF28PB7ZC32 967 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 M0QZ92 97 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 GJB5O95377 273 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 P4HBP07237 508 aaKnown RBP12.52□□□□□ -0.41
SMG6-206ENST00000570668 MYOGP15173 224 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 U2AF2P26368 475 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMG6-206ENST00000570668 QARSP47897 775 aaKnown RBP12.52□□□□□ -0.41
SMG6-206ENST00000570668 PSMC5P62195 406 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 TMEM62Q0P6H9 643 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 ORC2Q13416 577 aaPredicted RBP12.52□□□□□ -0.41
SMG6-206ENST00000570668 EPHA7Q15375 998 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 CALCRLQ16602 461 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMG6-206ENST00000570668 TSHZ1Q6ZSZ6 1077 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 LINC01465Q8N7H1 131 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 BANK1Q8NDB2 785 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 MTMR9Q96QG7 549 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 CDX2Q99626 313 aaPredicted RBP12.52□□□□□ -0.41
SMG6-206ENST00000570668 CELF4Q9BZC1 486 aaKnown RBP12.52□□□□□ -0.41
SMG6-206ENST00000570668 NKX2-4Q9H2Z4 354 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 AGO3Q9H9G7 860 aaKnown RBP12.52□□□□□ -0.41
SMG6-206ENST00000570668 SLC28A3Q9HAS3 691 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 PCDHA12Q9UN75 941 aa12.52□□□□□ -0.41
SMG6-206ENST00000570668 EYSQ5T1H1 3165 aa12.51□□□□□ -0.41
SMG6-206ENST00000570668 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.51□□□□□ -0.41
SMG6-206ENST00000570668 TLL1O43897 1013 aa12.51□□□□□ -0.41
SMG6-206ENST00000570668 DKC1O60832 514 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMG6-206ENST00000570668 AMHP03971 560 aa12.51□□□□□ -0.41
SMG6-206ENST00000570668 TRAPPC10P48553 1259 aa12.51□□□□□ -0.41
SMG6-206ENST00000570668 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
SMG6-206ENST00000570668 GRIN2CQ14957 1233 aa12.51□□□□□ -0.41
SMG6-206ENST00000570668 METTL13Q8N6R0 699 aa12.51□□□□□ -0.41
SMG6-206ENST00000570668 CEP89Q96ST8 783 aa12.51□□□□□ -0.41
SMG6-206ENST00000570668 TMEM60Q9H2L4 133 aa12.51□□□□□ -0.41
SMG6-206ENST00000570668 TTC12Q9H892 705 aaPredicted RBP12.51□□□□□ -0.41
SMG6-206ENST00000570668 SEPT9Q9UHD8 586 aaPredicted RBP12.51□□□□□ -0.41
SMG6-206ENST00000570668 CA3P07451 260 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 ATP2B1P20020 1258 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 TMOD1P28289 359 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 GJB2P29033 226 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 CD52P31358 61 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 MCM7P33993 719 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 TXKP42681 527 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 TBC1D8BQ0IIM8 1120 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 CUL4AQ13619 759 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 PPP2R2DQ66LE6 453 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 NCAPH2Q6IBW4 605 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 EFCAB12Q6NXP0 572 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 FAM43BQ6ZT52 329 aaPredicted RBP12.5□□□□□ -0.41
SMG6-206ENST00000570668 ANO5Q75V66 913 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 TMCO2Q7Z6W1 182 aaPredicted RBP12.5□□□□□ -0.41
SMG6-206ENST00000570668 C4orf19Q8IY42 314 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 MYOCDQ8IZQ8 938 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 ZNF710Q8N1W2 664 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 TOP1MTQ969P6 601 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 RAD9AQ99638 391 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 LXNQ9BS40 222 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 ZBED2Q9BTP6 218 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 RGL1Q9NZL6 768 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 WRAP73Q9P2S5 460 aaPredicted RBP12.5□□□□□ -0.41
SMG6-206ENST00000570668 PADI3Q9ULW8 664 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.5□□□□□ -0.41
SMG6-206ENST00000570668 LOXHD1Q8IVV2 1947 aa12.5□□□□□ -0.41
SMG6-206ENST00000570668 IGKV6-21A0A0C4DH24 114 aa12.49□□□□□ -0.41
SMG6-206ENST00000570668 TMEM150BA6NC51 233 aa12.49□□□□□ -0.41
SMG6-206ENST00000570668 DDX11L8A8MPP1 907 aa12.49□□□□□ -0.41
SMG6-206ENST00000570668 ENPP3O14638 875 aa12.49□□□□□ -0.41
SMG6-206ENST00000570668 GPR32O75388 356 aa12.49□□□□□ -0.41
SMG6-206ENST00000570668 SLITRK3O94933 977 aa12.49□□□□□ -0.41
SMG6-206ENST00000570668 VTNP04004 478 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms