RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 PADI6Q6TGC4 694 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 ILDR2Q71H61 639 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 KIAA1328Q86T90 577 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 SMYD4Q8IYR2 804 aaPredicted RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 TCP11Q8WWU5 503 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 TBC1D5Q92609 795 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 PARK7Q99497 189 aaKnown RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 HSD17B14Q9BPX1 270 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 NDST4Q9H3R1 872 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 MYO6Q9UM54 1294 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 SNCAIPQ9Y6H5 919 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 A0A0U1RQG5 324 aaPredicted RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 SPDYE16A6NNV3 312 aaPredicted RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 NOP56O00567 594 aaKnown RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 RFC5P40937 340 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 SLC26A2P50443 739 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 STRN3Q13033 797 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 BRDTQ58F21 947 aaPredicted RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 WDR78Q5VTH9 848 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 SMYD5Q6GMV2 418 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 TAAR1Q96RJ0 339 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 DNAI2Q9GZS0 605 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 SPATC1LQ9H0A9 340 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 UNC45AQ9H3U1 944 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 TRAF3IP3Q9Y228 551 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 R3HCC1Q9Y3T6 440 aaKnown RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 ATAD5Q96QE3 1844 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 FRMD3A2A2Y4 597 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 STRNO43815 780 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 BMP6P22004 513 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 NR2F2P24468 414 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 ICAM3P32942 547 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 STK4Q13043 487 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 CTTNQ14247 550 aaKnown RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 CCAR2Q8N163 923 aaKnown RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 MNS1Q8NEH6 495 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 LENG9Q96B70 501 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 MMP19Q99542 508 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 PAGR1Q9BTK6 254 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 GLIS2Q9BZE0 524 aaPredicted RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 TAF1DQ9H5J8 278 aaPredicted RBP6.63□□□□□ -1.35
CYLD-216ENST00000569891 MLXIPQ9HAP2 919 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 ZNF536O15090 1300 aa6.63□□□□□ -1.35
CYLD-216ENST00000569891 CD44P16070 742 aaKnown RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 GIT2Q14161 759 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 SYCP1Q15431 976 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 ANKRD40Q6AI12 368 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 RINT1Q6NUQ1 792 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 GBP6Q6ZN66 633 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.62□□□□□ -1.35
CYLD-216ENST00000569891 SFR1Q86XK3 245 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 CALR3Q96L12 384 aaKnown RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 CCDC42Q96M95 316 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 INPP4AQ96PE3 977 aaPredicted RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 REEP2Q9BRK0 252 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 MMRN2Q9H8L6 949 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 ATP6V0A4Q9HBG4 840 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 K7ENM7 598 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 DDX39AO00148 427 aaKnown RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 IRF6O14896 467 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 AFPP02771 609 aaKnown RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 CASQ1P31415 396 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 YWHABP31946 246 aaKnown RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 MARSP56192 900 aaKnown RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 RTP1P59025 263 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 HERVK_113P62684 666 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 CDK17Q00537 523 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 ENPEPQ07075 957 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 SHROOM1Q2M3G4 852 aaPredicted RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 SLC9C1Q4G0N8 1177 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 C10orf76Q5T2E6 689 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 TCERG1LQ5VWI1 586 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 INTS8Q75QN2 995 aaKnown RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 SLC7A3Q8WY07 619 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 DNAJC19Q96DA6 116 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 ZNF830Q96NB3 372 aaPredicted RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 SPAG5Q96R06 1193 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 RRAGDQ9NQL2 400 aaPredicted RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 CYP39A1Q9NYL5 469 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 CAPN11Q9UMQ6 739 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 SMCHD1A6NHR9 2005 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 MAPK13O15264 365 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 P4HA2O15460 535 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 SLITRK3O94933 977 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 PLS3P13797 630 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 CASP1P29466 404 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 UBXN2AP68543 259 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 SPIRE1Q08AE8 756 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 TTLL4Q14679 1199 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 SLFN12LQ6IEE8 588 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 ZNF507Q8TCN5 953 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 CPLX3Q8WVH0 158 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 ZNF592Q92610 1267 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 SYN2Q92777 582 aaPredicted RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 ALS2CR12Q96Q35 445 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 HAUS4Q9H6D7 363 aa6.62□□□□□ -1.35
CYLD-216ENST00000569891 ZCCHC17Q9NP64 241 aaKnown RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.62□□□□□ -1.35
CYLD-216ENST00000569891 DYNC1I1O14576 645 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms