RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 TADA3O75528 432 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 SFNP31947 248 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 CLCN6P51797 869 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 GOLGA8FQ08AF8 430 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 GOLGA8DPQ0D2H9 430 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 TMEM63BQ5T3F8 832 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 UBXN4Q92575 508 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 COPS5Q92905 334 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 FERMT2Q96AC1 680 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 RNF208Q9H0X6 261 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 XPNPEP3Q9NQH7 507 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 PCDHA12Q9UN75 941 aa17.12■□□□□ 0.33
VAC14-211ENST00000568886 EFCAB8A8MWE9 144 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 ADAMTS4O75173 837 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 GJB1P08034 283 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 CDK11BP21127 795 aaKnown RBP17.11■□□□□ 0.33
VAC14-211ENST00000568886 CPT1AP50416 773 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 FAM193AP78312 1265 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 SPIRE1Q08AE8 756 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 BRDTQ58F21 947 aaPredicted RBP17.11■□□□□ 0.33
VAC14-211ENST00000568886 MNS1Q8NEH6 495 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 CCDC34Q96HJ3 373 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 CSRNP2Q9H175 543 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 SYNRGQ9UMZ2 1314 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 DYNC1LI2O43237 492 aaPredicted RBP17.11■□□□□ 0.33
VAC14-211ENST00000568886 ATG7O95352 703 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 TPM1P09493 284 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 JAK3P52333 1124 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 PDIA5Q14554 519 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 TERF2Q15554 542 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 KLHDC9Q8NEP7 349 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 SPATA33Q96N06 139 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 MED15Q96RN5 788 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 RAB34Q9BZG1 259 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 CRISPLD2Q9H0B8 497 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 PKD2L1Q9P0L9 805 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
VAC14-211ENST00000568886 FRMPD3Q5JV73 1810 aa17.1■□□□□ 0.33
VAC14-211ENST00000568886 POTEFA5A3E0 1075 aa17.1■□□□□ 0.33
VAC14-211ENST00000568886 WDR64B1ANS9 1081 aa17.1■□□□□ 0.33
VAC14-211ENST00000568886 KPNA6O60684 536 aa17.1■□□□□ 0.33
VAC14-211ENST00000568886 URI1O94763 535 aaPredicted RBP17.1■□□□□ 0.33
VAC14-211ENST00000568886 GJC2Q5T442 439 aaPredicted RBP17.1■□□□□ 0.33
VAC14-211ENST00000568886 DTHD1Q6ZMT9 781 aa17.1■□□□□ 0.33
VAC14-211ENST00000568886 GPR20Q99678 358 aa17.1■□□□□ 0.33
VAC14-211ENST00000568886 ARGLU1Q9NWB6 273 aaPredicted RBP17.1■□□□□ 0.33
VAC14-211ENST00000568886 OGDHLQ9ULD0 1010 aa17.1■□□□□ 0.33
VAC14-211ENST00000568886 A0A1B0GTH6 734 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 PPFIA4O75335 1185 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 CCNE2O96020 404 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 TXKP42681 527 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 NR1I3Q14994 352 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 ZNF771Q7L3S4 317 aaPredicted RBP17.09■□□□□ 0.33
VAC14-211ENST00000568886 CREBRFQ8IUR6 639 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 GRAMD1CQ8IYS0 662 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 IGSF22Q8N9C0 903 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 SEPT1Q8WYJ6 367 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 LENG1Q96BZ8 264 aaPredicted RBP17.09■□□□□ 0.33
VAC14-211ENST00000568886 UNC45AQ9H3U1 944 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 FHOD1Q9Y613 1164 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 NOP56O00567 594 aaKnown RBP17.09■□□□□ 0.33
VAC14-211ENST00000568886 ZEB2O60315 1214 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 ACTR2P61160 394 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 FSCN1Q16658 493 aaKnown RBP17.09■□□□□ 0.33
VAC14-211ENST00000568886 HSDL1Q3SXM5 330 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 HSP90AA4PQ58FG1 418 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 RNF180Q86T96 592 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 PDILTQ8N807 584 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 AFG1LQ8WV93 481 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 AK8Q96MA6 479 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 TSEN34Q9BSV6 310 aaKnown RBP17.09■□□□□ 0.33
VAC14-211ENST00000568886 BCAS3Q9H6U6 928 aa17.09■□□□□ 0.33
VAC14-211ENST00000568886 IGKV6D-21A0A0A0MT36 114 aa17.08■□□□□ 0.33
VAC14-211ENST00000568886 SLC26A4O43511 780 aa17.08■□□□□ 0.33
VAC14-211ENST00000568886 ZRANB2O95218 330 aaKnown RBP eCLIP17.08■□□□□ 0.33
VAC14-211ENST00000568886 SGPL1O95470 568 aa17.08■□□□□ 0.33
VAC14-211ENST00000568886 MMP3P08254 477 aa17.08■□□□□ 0.33
VAC14-211ENST00000568886 ABHD15Q6UXT9 468 aa17.08■□□□□ 0.33
VAC14-211ENST00000568886 USP49Q70CQ1 688 aa17.08■□□□□ 0.33
VAC14-211ENST00000568886 SH3RF1Q7Z6J0 888 aa17.08■□□□□ 0.33
VAC14-211ENST00000568886 PCSK9Q8NBP7 692 aaKnown RBP17.08■□□□□ 0.33
VAC14-211ENST00000568886 DEFB118Q96PH6 123 aa17.08■□□□□ 0.33
VAC14-211ENST00000568886 PCDHA10Q9Y5I2 948 aa17.08■□□□□ 0.33
VAC14-211ENST00000568886 EMSYQ7Z589 1322 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 GSTTP1A0A1W2PQM5 241 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 LGR5O75473 907 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 CASQ1P31415 396 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 LONP1P36776 959 aaKnown RBP17.08■□□□□ 0.32
VAC14-211ENST00000568886 GJA8P48165 433 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 EPHA7Q15375 998 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 DGKDQ16760 1214 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 CCSAPQ6IQ19 270 aaPredicted RBP17.08■□□□□ 0.32
VAC14-211ENST00000568886 MIS18BP1Q6P0N0 1132 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 NEK9Q8TD19 979 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 GJA10Q969M2 543 aa17.08■□□□□ 0.32
VAC14-211ENST00000568886 PANX2Q96RD6 677 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms