RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 LZTS1Q9Y250 596 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 TAF6LQ9Y6J9 622 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 DMDP11532 3685 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 KMT2EQ8IZD2 1858 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 PROB1E7EW31 1015 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 MGEA5O60502 916 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 PLEKHA8P1O95397 391 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 LAG3P18627 525 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 SLC26A2P50443 739 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 STAT5BP51692 787 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 ANTXR2P58335 489 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 FAM102BQ5T8I3 360 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 PLPP4Q5VZY2 271 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 SYCE2Q6PIF2 218 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 MTHFD1LQ6UB35 978 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 MB21D2Q8IYB1 491 aaPredicted RBP13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 RUFY2Q8WXA3 655 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 TCF25Q9BQ70 676 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 LY9Q9HBG7 655 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 ENTPD7Q9NQZ7 604 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 RGS18Q9NS28 235 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 TYW1Q9NV66 732 aaKnown RBP13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 PUF60Q9UHX1 559 aaKnown RBP13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 PCDHA6Q9UN73 950 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 NR2E1Q9Y466 385 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 PCDHA8Q9Y5H6 950 aa13.49□□□□□ -0.25
GTF3C1-209ENST00000568569 DCHS1Q96JQ0 3298 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 NFASCO94856 1347 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 C9IYK1 514 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 GPR182O15218 404 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 PDGFBP01127 241 aaPredicted RBP13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 SP100P23497 879 aaPredicted RBP13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 PLCB3Q01970 1234 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 PTH1RQ03431 593 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 MTMR3Q13615 1198 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 UBALD2Q8IYN6 164 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 KREMEN2Q8NCW0 462 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 TMEM40Q8WWA1 233 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 MXRA8Q9BRK3 442 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 APOL5Q9BWW9 433 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 ATP6V0A4Q9HBG4 840 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 NGRNQ9NPE2 291 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 TSHZ2Q9NRE2 1034 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 TMEM161AQ9NX61 479 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 HCSTQ9UBK5 93 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 NOC2LQ9Y3T9 749 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
GTF3C1-209ENST00000568569 FAM186AA6NE01 2351 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 SPTBN4Q9H254 2564 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 HBP1O60381 514 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 IGHDP01880 384 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 FGFR1P11362 822 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 KLRC1P26715 233 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 PDE4AP27815 886 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 PPM1AP35813 382 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 LLGL2Q6P1M3 1020 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 CASC1Q6TDU7 716 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 KIAA0319LQ8IZA0 1049 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 NECTIN4Q96NY8 510 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 MTA3Q9BTC8 594 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 CWH43Q9H720 699 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 ELAC1Q9H777 363 aaKnown RBP13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 ST3GAL5Q9UNP4 418 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 SORCS3Q9UPU3 1222 aa13.47□□□□□ -0.25
GTF3C1-209ENST00000568569 HIDE1A8MVS5 230 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 HOXA2O43364 376 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 ATG7O95352 703 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 GSPT1P15170 499 aaKnown RBP13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 TPRNQ4KMQ1 711 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 CEP55Q53EZ4 464 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 CES5AQ6NT32 575 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 NFXL1Q6ZNB6 911 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 ASCL5Q7RTU5 278 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 HEATR3Q7Z4Q2 680 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 CMTR1Q8N1G2 835 aaKnown RBP13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 TMTC2Q8N394 836 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 CYP2W1Q8TAV3 490 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 CASP10Q92851 521 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 TMEM117Q9H0C3 514 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.25
GTF3C1-209ENST00000568569 COL1A2P08123 1366 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 PLXNA4Q9HCM2 1894 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 IGKV6D-21A0A0A0MT36 114 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 PRR23AA6NEV1 266 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 CCDC69A6NI79 296 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 C2CD4DB7Z1M9 353 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 BACH1O14867 736 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 BRD1O95696 1058 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 CALM1P0DP23 149 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 CALM2P0DP24 149 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 CALM3P0DP25 149 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 RXRAP19793 462 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 NBL1P41271 181 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 CRYBB1P53674 252 aaPredicted RBP13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 FAM189BP81408 668 aa13.45□□□□□ -0.26
GTF3C1-209ENST00000568569 KRT17Q04695 432 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms