RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 TAF2Q6P1X5 1199 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 TAS1R3Q7RTX0 852 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 SGMS1Q86VZ5 419 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 CMTR1Q8N1G2 835 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 ZNF713Q8N859 430 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 DBF4BQ8NFT6 615 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 CCDC12Q8WUD4 166 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 DHX38Q92620 1227 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 GPKOWQ92917 476 aaPredicted RBP eCLIP5.32□□□□□ -1.562e-6■■□□□ 11.5
HERPUD1-213ENST00000568358 VWCEQ96DN2 955 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 SAMD11Q96NU1 681 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 CTAGE1Q96RT6 745 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 UHRF1Q96T88 793 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 LRRC2Q9BYS8 371 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 JADE2Q9NQC1 790 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 PRDM6Q9NQX0 595 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 SETD4Q9NVD3 440 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 TCEAL9Q9UHQ7 104 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 MTUS1Q9ULD2 1270 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 PCDHA6Q9UN73 950 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 PCDHA8Q9Y5H6 950 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 MTCH2Q9Y6C9 303 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 TAF6LQ9Y6J9 622 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 V9GY48 417 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 SIP14410 1827 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 PTPRSQ13332 1948 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 FRMPD4Q14CM0 1322 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 NLRC5Q86WI3 1866 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 UNC80Q8N2C7 3258 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 hCG_1642624A0A1W2PR95 340 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 SMCO2A6NFE2 343 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 GOLGA8AA7E2F4 631 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 GOLGA8BA8MQT2 603 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 ICMTO60725 284 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 CDC45O75419 566 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 CTSHP09668 335 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 MARK3P27448 753 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 PSMA5P28066 241 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 PTPN5P54829 565 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 ERVK-21P61565 698 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 IGBP1P78318 339 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 DEFB103AP81534 67 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 PPFIA1Q13136 1202 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 GRB10Q13322 594 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 GPNMBQ14956 572 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 UBE2SQ16763 222 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 SLC35G1Q2M3R5 365 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 TRIM71Q2Q1W2 868 aaKnown RBP5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 TSNAXIP1Q2TAA8 658 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 TSGA10IPQ3SY00 556 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 CRTC2Q53ET0 693 aaPredicted RBP5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 ODR4Q5SWX8 454 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 FAM160B1Q5W0V3 765 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 TMTC3Q6ZXV5 915 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 RAB11FIP4Q86YS3 637 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 LMBR1Q8WVP7 490 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 WNT2BQ93097 391 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 IL17RAQ96F46 866 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 CCDC136Q96JN2 1154 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 MXRA8Q9BRK3 442 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 IFIH1Q9BYX4 1025 aaKnown RBP5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 ADAM33Q9BZ11 813 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 C6orf50Q9HD87 102 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 JPH1Q9HDC5 661 aaPredicted RBP5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 RIC8AQ9NPQ8 531 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 PKD2L1Q9P0L9 805 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 SLC9A2Q9UBY0 812 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 RWDD3Q9Y3V2 267 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 PRUNE2Q8WUY3 3088 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 NCOR1O75376 2440 aa5.31□□□□□ -1.56
HERPUD1-213ENST00000568358 CUL9Q8IWT3 2517 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 TTC3P53804 2025 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 KLF18A0A0U1RQI7 1052 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 LINC01553A4QN01 128 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 BACH1O14867 736 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 NCK2O43639 380 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 ATP9AO75110 1047 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 REC8O95072 547 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 KCNA2P16389 499 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 ITGB5P18084 799 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 GNA11P29992 359 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 HOXC8P31273 242 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 SLC26A2P50443 739 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 METAP2P50579 478 aaKnown RBP eCLIP5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 STAT5BP51692 787 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 RCAN1P53805 252 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 USP46P62068 366 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 EXOSC10Q01780 885 aaKnown RBP5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 AP3B2Q13367 1082 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 GRIK4Q16099 956 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 CEP55Q53EZ4 464 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 FAM26DQ5JW98 314 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 SDE2Q6IQ49 451 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 PPP1R18Q6NYC8 613 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 MIS18BP1Q6P0N0 1132 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 APOA5Q6Q788 366 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 BLOC1S2Q6QNY1 142 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 THSD4Q6ZMP0 1018 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms