RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 ITGB3BPQ13352 177 aaPredicted RBP25.6■■□□□ 1.69
LINC00543-201ENST00000567234 MAP1SQ66K74 1059 aaPredicted RBP25.6■■□□□ 1.69
LINC00543-201ENST00000567234 WDR59Q6PJI9 974 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 NMRK2Q9NPI5 230 aa25.6■■□□□ 1.69
LINC00543-201ENST00000567234 MAFGO15525 162 aa25.59■■□□□ 1.69
LINC00543-201ENST00000567234 HOXD13P35453 343 aa25.59■■□□□ 1.69
LINC00543-201ENST00000567234 KLK7P49862 253 aa25.59■■□□□ 1.69
LINC00543-201ENST00000567234 GNG11P61952 73 aa25.59■■□□□ 1.69
LINC00543-201ENST00000567234 MAP3K9P80192 1104 aa25.59■■□□□ 1.69
LINC00543-201ENST00000567234 BAATQ14032 418 aaPredicted RBP25.59■■□□□ 1.69
LINC00543-201ENST00000567234 GOLGA5Q8TBA6 731 aa25.59■■□□□ 1.69
LINC00543-201ENST00000567234 CHP1Q99653 195 aa25.59■■□□□ 1.69
LINC00543-201ENST00000567234 TEX13BQ9BXU2 312 aa25.59■■□□□ 1.69
LINC00543-201ENST00000567234 DBR1Q9UK59 544 aaKnown RBP25.59■■□□□ 1.69
LINC00543-201ENST00000567234 DCAF8L1A6NGE4 600 aa25.58■■□□□ 1.69
LINC00543-201ENST00000567234 NDUFA10O95299 355 aa25.58■■□□□ 1.69
LINC00543-201ENST00000567234 MYBP10242 640 aa25.58■■□□□ 1.69
LINC00543-201ENST00000567234 RPL13P26373 211 aaKnown RBP25.58■■□□□ 1.69
LINC00543-201ENST00000567234 CCND2P30279 289 aa25.58■■□□□ 1.69
LINC00543-201ENST00000567234 PPP2R3AQ06190 1150 aa25.58■■□□□ 1.69
LINC00543-201ENST00000567234 STXBP4Q6ZWJ1 553 aa25.58■■□□□ 1.69
LINC00543-201ENST00000567234 MOB2Q70IA6 237 aa25.58■■□□□ 1.69
LINC00543-201ENST00000567234 FRMD5Q7Z6J6 570 aa25.58■■□□□ 1.69
LINC00543-201ENST00000567234 CCDC170Q8IYT3 715 aa25.58■■□□□ 1.69
LINC00543-201ENST00000567234 LOC285556D6RIA3 1793 aa25.58■■□□□ 1.69
LINC00543-201ENST00000567234 ARHGEF35A5YM69 484 aa25.58■■□□□ 1.68
LINC00543-201ENST00000567234 GCNT3O95395 438 aa25.58■■□□□ 1.68
LINC00543-201ENST00000567234 NR2F2P24468 414 aa25.58■■□□□ 1.68
LINC00543-201ENST00000567234 TMEM132BQ14DG7 1078 aa25.58■■□□□ 1.68
LINC00543-201ENST00000567234 NFIL3Q16649 462 aa25.58■■□□□ 1.68
LINC00543-201ENST00000567234 VSIG10LQ86VR7 867 aa25.58■■□□□ 1.68
LINC00543-201ENST00000567234 MYCT1Q8N699 235 aa25.58■■□□□ 1.68
LINC00543-201ENST00000567234 RASSF4Q9H2L5 321 aa25.58■■□□□ 1.68
LINC00543-201ENST00000567234 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.58■■□□□ 1.68
LINC00543-201ENST00000567234 SNCAIPQ9Y6H5 919 aa25.58■■□□□ 1.68
LINC00543-201ENST00000567234 PRPF6O94906 941 aaKnown RBP25.57■■□□□ 1.68
LINC00543-201ENST00000567234 MYCLP12524 364 aaPredicted RBP25.57■■□□□ 1.68
LINC00543-201ENST00000567234 CASQ1P31415 396 aa25.57■■□□□ 1.68
LINC00543-201ENST00000567234 QARSP47897 775 aaKnown RBP25.57■■□□□ 1.68
LINC00543-201ENST00000567234 JAK3P52333 1124 aa25.57■■□□□ 1.68
LINC00543-201ENST00000567234 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.57■■□□□ 1.68
LINC00543-201ENST00000567234 BANK1Q8NDB2 785 aa25.57■■□□□ 1.68
LINC00543-201ENST00000567234 RDM1Q8NG50 284 aa25.57■■□□□ 1.68
LINC00543-201ENST00000567234 GPRASP2Q96D09 838 aa25.57■■□□□ 1.68
LINC00543-201ENST00000567234 PLAGL2Q9UPG8 496 aa25.57■■□□□ 1.68
LINC00543-201ENST00000567234 KIAA1217Q5T5P2 1943 aa25.57■■□□□ 1.68
LINC00543-201ENST00000567234 DDX39AO00148 427 aaKnown RBP25.56■■□□□ 1.68
LINC00543-201ENST00000567234 ZBTB39O15060 712 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 SFNP31947 248 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 KRT76Q01546 638 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 ACAD9Q9H845 621 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 ST7Q9NRC1 585 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 PPP1R12BO60237 982 aaPredicted RBP25.56■■□□□ 1.68
LINC00543-201ENST00000567234 KIF5CO60282 957 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 CYLC1P35663 651 aaPredicted RBP25.56■■□□□ 1.68
LINC00543-201ENST00000567234 ZNF662Q6ZS27 426 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 ACRBPQ8NEB7 543 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 NSUN6Q8TEA1 469 aaKnown RBP25.56■■□□□ 1.68
LINC00543-201ENST00000567234 RABGGTAQ92696 567 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 YY1AP1Q9H869 796 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 MMRN2Q9H8L6 949 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 MYO1AQ9UBC5 1043 aa25.56■■□□□ 1.68
LINC00543-201ENST00000567234 WDR81Q562E7 1941 aa25.55■■□□□ 1.68
LINC00543-201ENST00000567234 SPDYE16A6NNV3 312 aaPredicted RBP25.55■■□□□ 1.68
LINC00543-201ENST00000567234 SLC16A3O15427 465 aaKnown RBP25.55■■□□□ 1.68
LINC00543-201ENST00000567234 STAM2O75886 525 aa25.55■■□□□ 1.68
LINC00543-201ENST00000567234 NR3C2P08235 984 aa25.55■■□□□ 1.68
LINC00543-201ENST00000567234 VGLL4Q14135 290 aa25.55■■□□□ 1.68
LINC00543-201ENST00000567234 NLRX1Q86UT6 975 aa25.55■■□□□ 1.68
LINC00543-201ENST00000567234 NEK11Q8NG66 645 aa25.55■■□□□ 1.68
LINC00543-201ENST00000567234 FIZ1Q96SL8 496 aa25.55■■□□□ 1.68
LINC00543-201ENST00000567234 METTL14Q9HCE5 456 aaKnown RBP25.55■■□□□ 1.68
LINC00543-201ENST00000567234 PKD2L1Q9P0L9 805 aa25.55■■□□□ 1.68
LINC00543-201ENST00000567234 TCEAL9Q9UHQ7 104 aa25.55■■□□□ 1.68
LINC00543-201ENST00000567234 POTEB2H3BUK9 544 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 FANCGO15287 622 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 IVLP07476 585 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 KRT83P78385 493 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 TUBB2AQ13885 445 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 ZNF720Q7Z2F6 126 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 C4orf19Q8IY42 314 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 INPP4AQ96PE3 977 aaPredicted RBP25.54■■□□□ 1.68
LINC00543-201ENST00000567234 WDR24Q96S15 920 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 SENP7Q9BQF6 1050 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 TUBB2BQ9BVA1 445 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 TIPINQ9BVW5 301 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 NUCKS1Q9H1E3 243 aaKnown RBP25.54■■□□□ 1.68
LINC00543-201ENST00000567234 LZTFL1Q9NQ48 299 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 SAMM50Q9Y512 469 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 ASTN1O14525 1302 aa25.54■■□□□ 1.68
LINC00543-201ENST00000567234 WDR64B1ANS9 1081 aa25.53■■□□□ 1.68
LINC00543-201ENST00000567234 KCNMA1Q12791 1236 aa25.53■■□□□ 1.68
LINC00543-201ENST00000567234 BRD3Q15059 726 aa25.53■■□□□ 1.68
LINC00543-201ENST00000567234 CC2D1AQ6P1N0 951 aaPredicted RBP25.53■■□□□ 1.68
LINC00543-201ENST00000567234 PADI6Q6TGC4 694 aa25.53■■□□□ 1.68
LINC00543-201ENST00000567234 FAM178BQ8IXR5 827 aa25.53■■□□□ 1.68
LINC00543-201ENST00000567234 ARFGAP3Q9NP61 516 aa25.53■■□□□ 1.68
LINC00543-201ENST00000567234 FAM207AQ9NSI2 230 aaPredicted RBP25.53■■□□□ 1.68
LINC00543-201ENST00000567234 ARMCX3Q9UH62 379 aaPredicted RBP25.53■■□□□ 1.68
LINC00543-201ENST00000567234 CSADQ9Y600 493 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms