RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 RCOR1Q9UKL0 485 aa12.85□□□□□ -0.35
KARS-207ENST00000566560 ALPK3Q96L96 1907 aa12.85□□□□□ -0.35
KARS-207ENST00000566560 ZNF862O60290 1169 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 CUTAO60888 179 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 MED24O75448 989 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 SMIM10L2AP0DMW4 78 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 SMIM10L2BP0DMW5 78 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 UBA7P41226 1012 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 PPFIA1Q13136 1202 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 ITGA7Q13683 1181 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 ZRSR1Q15695 479 aaKnown RBP12.84□□□□□ -0.35
KARS-207ENST00000566560 FAM47CQ5HY64 1035 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 SPECC1Q5M775 1068 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
KARS-207ENST00000566560 CABP7Q86V35 215 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 CATSPER3Q86XQ3 398 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 TPH2Q8IWU9 490 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 C7orf31Q8N865 590 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 PPP1R13LQ8WUF5 828 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 SYMPKQ92797 1274 aaKnown RBP12.84□□□□□ -0.35
KARS-207ENST00000566560 CDK5RAP3Q96JB5 506 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 EPAS1Q99814 870 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 HSD17B14Q9BPX1 270 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 POLR3CQ9BUI4 534 aaPredicted RBP12.84□□□□□ -0.35
KARS-207ENST00000566560 ZSWIM4Q9H7M6 989 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 WRAP73Q9P2S5 460 aaPredicted RBP12.84□□□□□ -0.35
KARS-207ENST00000566560 PCDHA7Q9UN72 937 aa12.84□□□□□ -0.35
KARS-207ENST00000566560 TRIP12Q14669 1992 aaPredicted RBP12.83□□□□□ -0.35
KARS-207ENST00000566560 SPATA31C1P0DKV0 1188 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 ATP4AP20648 1035 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 RPA1P27694 616 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 YWHABP31946 246 aaKnown RBP12.83□□□□□ -0.36
KARS-207ENST00000566560 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 XKR3Q5GH77 459 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 NFRKBQ6P4R8 1299 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 C4orf19Q8IY42 314 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 CALML4Q96GE6 196 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 CCDC43Q96MW1 224 aaKnown RBP12.83□□□□□ -0.36
KARS-207ENST00000566560 MMTAG2Q9BU76 263 aaKnown RBP12.83□□□□□ -0.36
KARS-207ENST00000566560 RNPEPQ9H4A4 650 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 PCDHGA10Q9Y5H3 936 aa12.83□□□□□ -0.36
KARS-207ENST00000566560 COL1A2P08123 1366 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 TMEM150BA6NC51 233 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 ARVCFO00192 962 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 SLC26A4O43511 780 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 HBP1O60381 514 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 SLITRK3O94933 977 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 LYPLA2O95372 231 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 MUTP22033 750 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 KARSQ15046 597 aaKnown RBP12.82□□□□□ -0.36
KARS-207ENST00000566560 GRIK4Q16099 956 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 ECM1Q16610 540 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 AXDND1Q5T1B0 1012 aaPredicted RBP12.82□□□□□ -0.36
KARS-207ENST00000566560 PLA2G4FQ68DD2 849 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 SHC4Q6S5L8 630 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 USP49Q70CQ1 688 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 UBE2Q1Q7Z7E8 422 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 LMBR1Q8WVP7 490 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 EPSTI1Q96J88 318 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 GBP4Q96PP9 640 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 CCSER1Q9C0I3 900 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 NT5C3AQ9H0P0 336 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 DDX19AQ9NUU7 478 aaKnown RBP12.82□□□□□ -0.36
KARS-207ENST00000566560 HDAC6Q9UBN7 1215 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 GTF2IRD1Q9UHL9 959 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 KIAA1024Q9UPX6 916 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 GRIN2DO15399 1336 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 MROH7Q68CQ1 1323 aa12.82□□□□□ -0.36
KARS-207ENST00000566560 C17orf102A2RUQ5 167 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 DDX11L8A8MPP1 907 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 PQBP1O60828 265 aaKnown RBP12.81□□□□□ -0.36
KARS-207ENST00000566560 INSRRP14616 1297 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 PLCG1P19174 1290 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 IGBP1P78318 339 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 PTPN11Q06124 597 aaPredicted RBP12.81□□□□□ -0.36
KARS-207ENST00000566560 GRB10Q13322 594 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 SNX17Q15036 470 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 TRIM60Q495X7 471 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 MTERF2Q49AM1 385 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 TMEM119Q4V9L6 283 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 HYIQ5T013 277 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 RESP18Q5W5W9 173 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 SLC39A5Q6ZMH5 540 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 ANO5Q75V66 913 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 PNMA5Q96PV4 448 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 PLIN2Q99541 437 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 SEZ6LQ9BYH1 1024 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 NRBP2Q9NSY0 501 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 SETD4Q9NVD3 440 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 FAM13BQ9NYF5 915 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 CCDC39Q9UFE4 941 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 NRCAMQ92823 1304 aa12.81□□□□□ -0.36
KARS-207ENST00000566560 TANC1Q9C0D5 1861 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 GOLGA6L4A6NEF3 574 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 STBD1O95210 358 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 GNAT1P11488 350 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms