RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 A0A1W2PQ45 241 aaPredicted RBP16.5■□□□□ 0.23
SPG7-213ENST00000566221 A0A1W2PQY0 241 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 E9PMD0 336 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 STBD1O95210 358 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 MBD3O95983 291 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 LIG1P18858 919 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 PSMC6P62333 389 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 NAALADL2Q58DX5 795 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 ANO5Q75V66 913 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 CEP57L1Q8IYX8 460 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 ENGASEQ8NFI3 743 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 GLT1D1Q96MS3 346 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 NIFKQ9BYG3 293 aaKnown RBP16.5■□□□□ 0.23
SPG7-213ENST00000566221 RNPEPQ9H4A4 650 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 BLOC1S4Q9NUP1 217 aa16.5■□□□□ 0.23
SPG7-213ENST00000566221 ARHGEF35A5YM69 484 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 ACTN4O43707 911 aaKnown RBP16.49■□□□□ 0.23
SPG7-213ENST00000566221 KINO60870 393 aaKnown RBP16.49■□□□□ 0.23
SPG7-213ENST00000566221 NR1I2O75469 434 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 ZNF202O95125 648 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 SLFN14P0C7P3 912 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 SMIM10L2AP0DMW4 78 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 SMIM10L2BP0DMW5 78 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 RARRES1P49788 294 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 CHMP4BP1P59074 171 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 PPFIA1Q13136 1202 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 SNW1Q13573 536 aaKnown RBP16.49■□□□□ 0.23
SPG7-213ENST00000566221 XKR9Q5GH70 373 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 ZNF484Q5JVG2 852 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 PLA2G4FQ68DD2 849 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 TRMT1LQ7Z2T5 733 aaKnown RBP16.49■□□□□ 0.23
SPG7-213ENST00000566221 LRRC15Q8TF66 581 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 CCDC34Q96HJ3 373 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 ANP32EQ9BTT0 268 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 BHMT2Q9H2M3 363 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 CYP26B1Q9NR63 512 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 DNAH12Q6ZR08 3092 aa16.49■□□□□ 0.23
SPG7-213ENST00000566221 TMEM150BA6NC51 233 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 ZBTB39O15060 712 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 PLA2G4BP0C869 781 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 SLC12A3P55017 1021 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 MCM6Q14566 821 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 NBPF20Q3BBV1 942 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 MTERF2Q49AM1 385 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 NFRKBQ6P4R8 1299 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 KRBA2Q6ZNG9 492 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 SV2BQ7L1I2 683 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 C7orf31Q8N865 590 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 SYT2Q8N9I0 419 aaPredicted RBP16.48■□□□□ 0.23
SPG7-213ENST00000566221 VTI1AQ96AJ9 217 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 CEP170P1Q96L14 293 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 TIGD1Q96MW7 591 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 SEZ6LQ9BYH1 1024 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 TNMDQ9H2S6 317 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 STARD7Q9NQZ5 370 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 DACT1Q9NYF0 836 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
SPG7-213ENST00000566221 NRCAMQ92823 1304 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 A0A087WWV3 80 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 A0A0U1RQG5 324 aaPredicted RBP16.47■□□□□ 0.23
SPG7-213ENST00000566221 RRN3P2A6NIE6 340 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 ZBTB42B2RXF5 422 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 SSBP05455 408 aaKnown RBP eCLIP16.47■□□□□ 0.23
SPG7-213ENST00000566221 INSRRP14616 1297 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 RFC5P40937 340 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 NPEPPSP55786 919 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 TARBP2Q15633 366 aaKnown RBP16.47■□□□□ 0.23
SPG7-213ENST00000566221 GRIK4Q16099 956 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 LONRF3Q496Y0 759 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 KANK3Q6NY19 840 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 SESTD1Q86VW0 696 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 EXOC8Q8IYI6 725 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 CNNM3Q8NE01 707 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 LRRC27Q9C0I9 530 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 KBTBD4Q9NVX7 518 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 KCND2Q9NZV8 630 aa16.47■□□□□ 0.23
SPG7-213ENST00000566221 COLQQ9Y215 455 aaPredicted RBP16.47■□□□□ 0.23
SPG7-213ENST00000566221 C17orf102A2RUQ5 167 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 DGAT1O75907 488 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 GNAT1P11488 350 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 HOXC8P31273 242 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 MNX1P50219 401 aaPredicted RBP16.46■□□□□ 0.23
SPG7-213ENST00000566221 POLGP54098 1239 aaPredicted RBP16.46■□□□□ 0.23
SPG7-213ENST00000566221 AMPD3Q01432 767 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 PTPN11Q06124 597 aaPredicted RBP16.46■□□□□ 0.23
SPG7-213ENST00000566221 TBC1D8BQ0IIM8 1120 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 ITGA7Q13683 1181 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 FAM47CQ5HY64 1035 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 PADI6Q6TGC4 694 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 GPBP1Q86WP2 473 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 GPT2Q8TD30 523 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 LMBR1Q8WVP7 490 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 SLC7A3Q8WY07 619 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 JPH2Q9BR39 696 aaPredicted RBP16.46■□□□□ 0.23
SPG7-213ENST00000566221 GTF2IRD1Q9UHL9 959 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 ALPK3Q96L96 1907 aa16.46■□□□□ 0.23
SPG7-213ENST00000566221 GAS2O43903 313 aaKnown RBP16.45■□□□□ 0.22
SPG7-213ENST00000566221 TRAK2O60296 914 aa16.45■□□□□ 0.22
SPG7-213ENST00000566221 USO1O60763 962 aaKnown RBP16.45■□□□□ 0.22
SPG7-213ENST00000566221 IGBP1P78318 339 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms