RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 PNOCQ13519 176 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 ALCAMQ13740 583 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 HSP90AA2PQ14568 343 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-207ENST00000566095 PKN2Q16513 984 aaKnown RBP10.9□□□□□ -0.66
SF3B3-207ENST00000566095 UTP14CQ5TAP6 766 aaKnown RBP10.9□□□□□ -0.66
SF3B3-207ENST00000566095 ZNF658Q5TYW1 1059 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-207ENST00000566095 RETREG2Q8NC44 543 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 TRIB2Q92519 343 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 DDX12PQ92771 950 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 KIFAP3Q92845 792 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 CEP170P1Q96L14 293 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 PDGFCQ9NRA1 345 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 BLOC1S4Q9NUP1 217 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 FLRT1Q9NZU1 646 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 LARSQ9P2J5 1176 aaKnown RBP10.9□□□□□ -0.66
SF3B3-207ENST00000566095 GABRQQ9UN88 632 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 TRIM17Q9Y577 477 aa10.9□□□□□ -0.66
SF3B3-207ENST00000566095 COL1A2P08123 1366 aa10.9□□□□□ -0.67
SF3B3-207ENST00000566095 MCM3APO60318 1980 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 GSTTP1A0A1W2PQM5 241 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 PSMA7O14818 248 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 DYNC1LI2O43237 492 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 CABYRO75952 493 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 IGHA2P01877 340 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 RPLP2P05387 115 aaKnown RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 GNAT1P11488 350 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 HOXD8P13378 290 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 CTGFP29279 349 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 RARRES1P49788 294 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 DNM2P50570 870 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 POLGP54098 1239 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 PPP2R5AQ15172 486 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 CCL14Q16627 93 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 ZNF484Q5JVG2 852 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 PADI6Q6TGC4 694 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 CCDC60Q8IWA6 550 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 ZNF710Q8N1W2 664 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 PCSK9Q8NBP7 692 aaKnown RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 ATP8B4Q8TF62 1192 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 AFG1LQ8WV93 481 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 TCP11Q8WWU5 503 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 IFT74Q96LB3 600 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 NIFKQ9BYG3 293 aaKnown RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 DNAJC25Q9H1X3 360 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 ATP6V0A4Q9HBG4 840 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 PARVGQ9HBI0 331 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 HMX1Q9NP08 348 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 CYP26B1Q9NR63 512 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 PANK4Q9NVE7 773 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 TRPC6Q9Y210 931 aa10.89□□□□□ -0.67
SF3B3-207ENST00000566095 GNEQ9Y223 722 aaKnown RBP10.89□□□□□ -0.67
SF3B3-207ENST00000566095 BICDL2A1A5D9 508 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 RRN3P2A6NIE6 340 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 A6NJR5 290 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 MAGEB2O15479 319 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 SLC34A2O95436 690 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 LGALS2P05162 132 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 MMP3P08254 477 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 MAPTP10636 758 aaKnown RBP10.88□□□□□ -0.67
SF3B3-207ENST00000566095 CYP11B2P19099 503 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 TMOD1P28289 359 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 CTCFP49711 727 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-207ENST00000566095 SMTNP53814 917 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 GJA9P57773 515 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 CDC42EP1Q00587 391 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 SPAG1Q07617 926 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 TBC1D8BQ0IIM8 1120 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 CUL4BQ13620 913 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 FSCN1Q16658 493 aaKnown RBP10.88□□□□□ -0.67
SF3B3-207ENST00000566095 DPCR1Q3MIW9 517 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 HSDL1Q3SXM5 330 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 HERC4Q5GLZ8 1057 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-207ENST00000566095 RINT1Q6NUQ1 792 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 DYMQ7RTS9 669 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 RNF180Q86T96 592 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 PIGOQ8TEQ8 1089 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 NOC3LQ8WTT2 800 aaKnown RBP10.88□□□□□ -0.67
SF3B3-207ENST00000566095 DHTKD1Q96HY7 919 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-207ENST00000566095 CTAGE1Q96RT6 745 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 SEZ6LQ9BYH1 1024 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 BLZF1Q9H2G9 400 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 MAN1B1Q9UKM7 699 aa10.88□□□□□ -0.67
SF3B3-207ENST00000566095 MYH9P35579 1960 aaKnown RBP10.88□□□□□ -0.67
SF3B3-207ENST00000566095 DOCK3Q8IZD9 2030 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 UBE4BO95155 1302 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 MYMKA6NI61 221 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 LRRC10BA6NIK2 292 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 H3BRB1 525 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 CBFA2T2O43439 604 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 SORBS3O60504 671 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 USO1O60763 962 aaKnown RBP10.87□□□□□ -0.67
SF3B3-207ENST00000566095 FGFR1OPO95684 399 aaKnown RBP10.87□□□□□ -0.67
SF3B3-207ENST00000566095 C6orf222P0C671 652 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-207ENST00000566095 RTP1P59025 263 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 NKX3-2P78367 333 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 CACNB2Q08289 660 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-207ENST00000566095 DMP1Q13316 513 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-207ENST00000566095 ECM1Q16610 540 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms