RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ARHGAP20Q9P2F6 1191 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 MAPK8IP1Q9UQF2 711 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 THRAP3Q9Y2W1 955 aaKnown RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 ARL2BPQ9Y2Y0 163 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 ARHGEF37A1IGU5 675 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 NOP56O00567 594 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 MMEP08473 750 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 COPS2P61201 443 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 KANK3Q6NY19 840 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 NLRP3Q96P20 1036 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 NACA2Q9H009 215 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 GJB4Q9NTQ9 266 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 RABL2AQ9UBK7 228 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 BARX2Q9UMQ3 279 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 TFR2Q9UP52 801 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 CTNND2Q9UQB3 1225 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TLR2O60603 784 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 ZFYP08048 801 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 EEF1GP26641 437 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 KRT71Q3SY84 523 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TCERG1LQ5VWI1 586 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 BICDL1Q6ZP65 573 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 STXBP4Q6ZWJ1 553 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 PPFIBP2Q8ND30 876 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 FERMT2Q96AC1 680 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 GBP5Q96PP8 586 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TMEM237Q96Q45 408 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 GSDMAQ96QA5 445 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 NSRP1Q9H0G5 558 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 PCDH18Q9HCL0 1135 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 KRT82Q9NSB4 513 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 NENFQ9UMX5 172 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 USP15Q9Y4E8 981 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 USP31Q70CQ4 1352 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 KANSL1LA0AUZ9 987 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 MAGEA13PA6NCF6 341 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 SLC26A4O43511 780 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 VIL1P09327 827 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 MSL3P1P0C860 447 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 GSTT1P30711 240 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 KLC1Q07866 573 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 WDR72Q3MJ13 1102 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 MCMDC2Q4G0Z9 681 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 MAEAQ7L5Y9 396 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TRPM8Q7Z2W7 1104 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 PHLDB2Q86SQ0 1253 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 NOSTRINQ8IVI9 506 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 ANKRD13CQ8N6S4 541 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 KBTBD3Q8NAB2 608 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 MAML3Q96JK9 1138 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 ALG1Q9BT22 464 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 FAM124BQ9H5Z6 455 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 NDUFA13Q9P0J0 144 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 DDX25Q9UHL0 483 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 TMEM59LQ9UK28 342 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 PNMA3Q9UL41 463 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 DUSP10Q9Y6W6 482 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 A0A087WZG4 1122 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 BIRC5O15392 142 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 BUD23O43709 281 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 SERPINB7O75635 380 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 GNA14O95837 355 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 LONP1P36776 959 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 BTNL9Q6UXG8 535 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 KRT26Q7Z3Y9 468 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 EXOC3L1Q86VI1 746 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 DIS3L2Q8IYB7 885 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 USP33Q8TEY7 942 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 AIFM3Q96NN9 605 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 NR1H4Q96RI1 486 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 HAPLN3Q96S86 360 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 ZDHHC18Q9NUE0 388 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 PNPLA7Q6ZV29 1317 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 SNX3O60493 162 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TMCC1O94876 653 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 PAFAH1B1P43034 410 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 RTP1P59025 263 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 EIF4A1P60842 406 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 HPCAP84074 193 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 ANGPT1Q15389 498 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 CFAP157Q5JU67 520 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 VSTM1Q6UX27 236 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 C3orf62Q6ZUJ4 267 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 SMYD1Q8NB12 490 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 USP38Q8NB14 1042 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 ITPKCQ96DU7 683 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 DPH5Q9H2P9 285 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 SPANXA1Q9NS26 97 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 EMC3Q9P0I2 261 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 IARSP41252 1262 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 CDK7P50613 346 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TSNAXIP1Q2TAA8 658 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 PDXDC2PQ6P474 469 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 ZNF554Q86TJ5 538 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TLK2Q86UE8 772 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 KIF2BQ8N4N8 673 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TBC1D7Q9P0N9 293 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 MAST3O60307 1309 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 RBAK-RBAKDNI3L0D1 243 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms