RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 CDHR5Q9HBB8 845 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 TTC28Q96AY4 2481 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 ADGRA3Q8IWK6 1321 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 LOXHD1Q8IVV2 1947 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 WDR64B1ANS9 1081 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 TNFRSF10AO00220 468 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 ZNF862O60290 1169 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 PFKFB2O60825 505 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 DGKIO75912 1065 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 ANAPC15P60006 121 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 PAK2Q13177 524 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 GPM6BQ13491 265 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 Q4G0T1 1027 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 GALNT17Q6IS24 598 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 LINC01465Q8N7H1 131 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 TMEM40Q8WWA1 233 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 HLA-CQ95604 372 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 GJA10Q969M2 543 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 MRPL38Q96DV4 380 aaKnown RBP17.72■□□□□ 0.43
CDH3-204ENST00000565453 UHRF1Q96T88 793 aaPredicted RBP17.72■□□□□ 0.43
CDH3-204ENST00000565453 ERVK-5Q9HDB9 667 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 TPCN1Q9ULQ1 816 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 REV3LO60673 3130 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 STK36Q9NRP7 1315 aa17.72■□□□□ 0.43
CDH3-204ENST00000565453 WDR81Q562E7 1941 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 C5orf67F2Z3F1 127 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 PSMD10O75832 226 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 TDP2O95551 362 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 TMEM266Q2M3C6 531 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 MOXD1Q6UVY6 613 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 B3GNT9Q6UX72 402 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 CKAP2LQ8IYA6 745 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 CLP1Q92989 425 aaKnown RBP17.71■□□□□ 0.43
CDH3-204ENST00000565453 UNC45AQ9H3U1 944 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 DISC1Q9NRI5 854 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 TCEAL9Q9UHQ7 104 aa17.71■□□□□ 0.43
CDH3-204ENST00000565453 NOC2LQ9Y3T9 749 aaKnown RBP17.71■□□□□ 0.43
CDH3-204ENST00000565453 MYH9P35579 1960 aaKnown RBP17.71■□□□□ 0.43
CDH3-204ENST00000565453 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.7■□□□□ 0.42
CDH3-204ENST00000565453 GAS7O60861 476 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 GPR32O75388 356 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 BMPR1AP36894 532 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 UGCGQ16739 394 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 LRCH2Q5VUJ6 765 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 NPAS4Q8IUM7 802 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 IL27Q8NEV9 243 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 ETNPPLQ8TBG4 499 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 FAM167AQ96KS9 214 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 NECAB3Q96P71 396 aaPredicted RBP17.7■□□□□ 0.42
CDH3-204ENST00000565453 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 TEKT3Q9BXF9 490 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 SLKQ9H2G2 1235 aaPredicted RBP17.7■□□□□ 0.42
CDH3-204ENST00000565453 KCNJ14Q9UNX9 436 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 SAMM50Q9Y512 469 aa17.7■□□□□ 0.42
CDH3-204ENST00000565453 EVPLQ92817 2033 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 MGEA5O60502 916 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 RPS6KA5O75582 802 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 CDKL5O76039 1030 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 CTDNEP1O95476 244 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 OATP04181 439 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 RB1P06400 928 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 SFNP31947 248 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 CTNNB1P35222 781 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 JAK3P52333 1124 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 BTG3Q14201 252 aaPredicted RBP17.69■□□□□ 0.42
CDH3-204ENST00000565453 PTPROQ16827 1216 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 FAM43BQ6ZT52 329 aaPredicted RBP17.69■□□□□ 0.42
CDH3-204ENST00000565453 TRMT1LQ7Z2T5 733 aaKnown RBP17.69■□□□□ 0.42
CDH3-204ENST00000565453 CEP131Q9UPN4 1083 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 GINS2Q9Y248 185 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 RWDD3Q9Y3V2 267 aa17.69■□□□□ 0.42
CDH3-204ENST00000565453 TCF20Q9UGU0 1960 aaKnown RBP17.68■□□□□ 0.42
CDH3-204ENST00000565453 MAGEB2O15479 319 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 CHMP2AO43633 222 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 DTNBO60941 627 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 CRYBB1P53674 252 aaPredicted RBP17.68■□□□□ 0.42
CDH3-204ENST00000565453 AK2P54819 239 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 PRKCEQ02156 737 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 NFX1Q12986 1120 aaKnown RBP17.68■□□□□ 0.42
CDH3-204ENST00000565453 NONOQ15233 471 aaKnown RBP eCLIP17.68■□□□□ 0.42
CDH3-204ENST00000565453 KIZQ2M2Z5 673 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 TIGD5Q53EQ6 642 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 KRT25Q7Z3Z0 450 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 FAM228AQ86W67 206 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 CMTR2Q8IYT2 770 aaKnown RBP17.68■□□□□ 0.42
CDH3-204ENST00000565453 RDM1Q8NG50 284 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 PPP1R16BQ96T49 567 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 OSMRQ99650 979 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 UBE2ZQ9H832 354 aaPredicted RBP17.68■□□□□ 0.42
CDH3-204ENST00000565453 GJB4Q9NTQ9 266 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 ST3GAL5Q9UNP4 418 aa17.68■□□□□ 0.42
CDH3-204ENST00000565453 ATG2AQ2TAZ0 1938 aa17.67■□□□□ 0.42
CDH3-204ENST00000565453 STBD1O95210 358 aa17.67■□□□□ 0.42
CDH3-204ENST00000565453 VTNP04004 478 aa17.67■□□□□ 0.42
CDH3-204ENST00000565453 STAG3L1P0CL83 205 aa17.67■□□□□ 0.42
CDH3-204ENST00000565453 SARSP49591 514 aaKnown RBP17.67■□□□□ 0.42
CDH3-204ENST00000565453 CLCN3P51790 818 aa17.67■□□□□ 0.42
CDH3-204ENST00000565453 TARBP2Q15633 366 aaKnown RBP17.67■□□□□ 0.42
CDH3-204ENST00000565453 INF2Q27J81 1249 aa17.67■□□□□ 0.42
CDH3-204ENST00000565453 METTL13Q8N6R0 699 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms