RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ANKS4BQ8N8V4 417 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 FOXO6A8MYZ6 492 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 MPHOSPH10O00566 681 aaKnown RBP17.72■□□□□ 0.43
LINC00554-201ENST00000564841 RAB27AP51159 221 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 ZNF268Q14587 947 aaPredicted RBP17.72■□□□□ 0.43
LINC00554-201ENST00000564841 RPS6KA1Q15418 735 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 AGBL2Q5U5Z8 902 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 MGARPQ8TDB4 240 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 TAF4BQ92750 862 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 RNF14Q9UBS8 474 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 CACNA1SQ13698 1873 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 DPPA5A6NC42 116 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 SPDYE5A6NIY4 337 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 BAG3O95817 575 aa17.72■□□□□ 0.43
LINC00554-201ENST00000564841 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
LINC00554-201ENST00000564841 ATXN2LQ8WWM7 1075 aaKnown RBP17.72■□□□□ 0.43
LINC00554-201ENST00000564841 ZC3H12CQ9C0D7 883 aaKnown RBP17.72■□□□□ 0.43
LINC00554-201ENST00000564841 ZMYND8Q9ULU4 1186 aaPredicted RBP17.72■□□□□ 0.43
LINC00554-201ENST00000564841 CASZ1Q86V15 1759 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 A0A1B0GVG6 124 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 BICDL2A1A5D9 508 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 KRIT1O00522 736 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 PECAM1P16284 738 aaPredicted RBP17.71■□□□□ 0.43
LINC00554-201ENST00000564841 RBM5P52756 815 aaKnown RBP eCLIP17.71■□□□□ 0.43
LINC00554-201ENST00000564841 CRY2Q49AN0 593 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 PIGWQ7Z7B1 504 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 FAM114A1Q8IWE2 563 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 FAM133AQ8N9E0 248 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 OSBPL1AQ9BXW6 950 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 DBNDD1Q9H9R9 158 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 KCNQ5Q9NR82 932 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 ATP8A2Q9NTI2 1148 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 TSKSQ9UJT2 592 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 PDHA1P08559 390 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 ATP2B4P23634 1241 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 RAPGEF1Q13905 1077 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 SCFD2Q8WU76 684 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 ANKS1AQ92625 1134 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 GJA10Q969M2 543 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 AZI2Q9H6S1 392 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 NOC2LQ9Y3T9 749 aaKnown RBP17.71■□□□□ 0.43
LINC00554-201ENST00000564841 DOCK2Q92608 1830 aa17.71■□□□□ 0.43
LINC00554-201ENST00000564841 BBOX1O75936 387 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 EIF6P56537 245 aaKnown RBP17.7■□□□□ 0.42
LINC00554-201ENST00000564841 ICA1Q05084 483 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 BLMHQ13867 455 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 RBBP5Q15291 538 aaKnown RBP17.7■□□□□ 0.42
LINC00554-201ENST00000564841 SLC35G1Q2M3R5 365 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 METTL13Q8N6R0 699 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 CORO1CQ9ULV4 474 aaPredicted RBP17.7■□□□□ 0.42
LINC00554-201ENST00000564841 NOL4O94818 638 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 TSPY3P0CV98 308 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 TSPY8P0CW00 308 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 CTCFP49711 727 aaPredicted RBP17.7■□□□□ 0.42
LINC00554-201ENST00000564841 RWDD2BP57060 319 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 RIPK1Q13546 671 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 CUL1Q13616 776 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 LETM2Q2VYF4 491 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 ZNF444Q8N0Y2 327 aaPredicted RBP17.7■□□□□ 0.42
LINC00554-201ENST00000564841 NKX1-2Q9UD57 310 aaPredicted RBP17.7■□□□□ 0.42
LINC00554-201ENST00000564841 PCDHGC5Q9Y5F6 944 aa17.7■□□□□ 0.42
LINC00554-201ENST00000564841 CCDC194A0A1B0GVG4 234 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 RAD21O60216 631 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 GNAT1P11488 350 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 ATP4AP20648 1035 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 CHRNA5P30532 468 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 PSMD2Q13200 908 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 TAF11Q15544 211 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 SLC9C1Q4G0N8 1177 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 FAM83BQ5T0W9 1011 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 ARMC9Q7Z3E5 817 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 BLIDQ8IZY5 108 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 TLCD1Q96CP7 247 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 KLHL29Q96CT2 875 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 IL17RBQ9NRM6 502 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 ADAM22Q9P0K1 906 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 SAMD15Q9P1V8 674 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 ANAPC4Q9UJX5 808 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 MYH1P12882 1939 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 CHD4Q14839 1912 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 BRWD3Q6RI45 1802 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 EN1Q05925 392 aaPredicted RBP17.69■□□□□ 0.42
LINC00554-201ENST00000564841 DPP8Q6V1X1 898 aaPredicted RBP17.69■□□□□ 0.42
LINC00554-201ENST00000564841 BORCS6Q96GS4 357 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 PYM1Q9BRP8 204 aaKnown RBP17.69■□□□□ 0.42
LINC00554-201ENST00000564841 ARPP21Q9UBL0 812 aaPredicted RBP17.69■□□□□ 0.42
LINC00554-201ENST00000564841 SWAP70Q9UH65 585 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 IRS2Q9Y4H2 1338 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 RGL2O15211 777 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 RXRBP28702 533 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 RPS6KA3P51812 740 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 MAN2A1Q16706 1144 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 SFMBT2Q5VUG0 894 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 PNMA1Q8ND90 353 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 P3H4Q92791 437 aa17.69■□□□□ 0.42
LINC00554-201ENST00000564841 PDGFDQ9GZP0 370 aaPredicted RBP17.69■□□□□ 0.42
LINC00554-201ENST00000564841 INTS9Q9NV88 658 aaKnown RBP17.69■□□□□ 0.42
LINC00554-201ENST00000564841 CABP7Q86V35 215 aa17.68■□□□□ 0.42
LINC00554-201ENST00000564841 TAX1BP1Q86VP1 789 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms