RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 MANFP55145 182 aaKnown RBP6.44□□□□□ -1.38
CDH1-207ENST00000564745 SRSF3P84103 164 aaKnown RBP6.44□□□□□ -1.38
CDH1-207ENST00000564745 SLC6A3Q01959 620 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 TMEM62Q0P6H9 643 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 C7orf31Q8N865 590 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 TUBGCP5Q96RT8 1024 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 SGPP1Q9BX95 441 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 CNTD2Q9H8S5 307 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 ARHGAP28Q9P2N2 729 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 IP6K2Q9UHH9 426 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 NOB1Q9ULX3 412 aaKnown RBP6.44□□□□□ -1.38
CDH1-207ENST00000564745 EDARQ9UNE0 448 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 LUC7L2Q9Y383 392 aaKnown RBP6.44□□□□□ -1.38
CDH1-207ENST00000564745 SPEF1Q9Y4P9 236 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 ASB1Q9Y576 335 aa6.44□□□□□ -1.38
CDH1-207ENST00000564745 BIN1O00499 593 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 ABLIM1O14639 778 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 PRPF3O43395 683 aaKnown RBP6.43□□□□□ -1.38
CDH1-207ENST00000564745 PRPF6O94906 941 aaKnown RBP6.43□□□□□ -1.38
CDH1-207ENST00000564745 ABLIM3O94929 683 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 LPLP06858 475 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 RBP3P10745 1247 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 PTGS1P23219 599 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 CDR1P51861 262 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 SRSF2Q01130 221 aaKnown RBP6.43□□□□□ -1.38
CDH1-207ENST00000564745 CACNB2Q08289 660 aaPredicted RBP6.43□□□□□ -1.38
CDH1-207ENST00000564745 ADCY1Q08828 1119 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 CLUL1Q15846 466 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 TTC38Q5R3I4 469 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 PRAMEF9Q5VWM5 478 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 CCDC62Q6P9F0 684 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 NOL8Q76FK4 1167 aaKnown RBP6.43□□□□□ -1.38
CDH1-207ENST00000564745 LDHDQ86WU2 507 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 PHYKPLQ8IUZ5 450 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 WDR75Q8IWA0 830 aaKnown RBP6.43□□□□□ -1.38
CDH1-207ENST00000564745 EAF2Q96CJ1 260 aaPredicted RBP6.43□□□□□ -1.38
CDH1-207ENST00000564745 DDX11Q96FC9 970 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 RHOBTB2Q9BYZ6 727 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 QRSL1Q9H0R6 528 aaKnown RBP6.43□□□□□ -1.38
CDH1-207ENST00000564745 CDH19Q9H159 772 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 NSUN3Q9H649 340 aaKnown RBP6.43□□□□□ -1.38
CDH1-207ENST00000564745 MKS1Q9NXB0 559 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 HSPBP1Q9NZL4 362 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 IRS2Q9Y4H2 1338 aa6.43□□□□□ -1.38
CDH1-207ENST00000564745 XPOTO43592 962 aaKnown RBP6.42□□□□□ -1.38
CDH1-207ENST00000564745 ZSCAN20P17040 1043 aaPredicted RBP6.42□□□□□ -1.38
CDH1-207ENST00000564745 CCND1P24385 295 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 EPHB3P54753 998 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 NKX3-2P78367 333 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 ALDH6A1Q02252 535 aaKnown RBP6.42□□□□□ -1.38
CDH1-207ENST00000564745 RTP5Q14D33 572 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 PITRM1Q5JRX3 1037 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 TOR2AQ5JU69 321 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 ESPNLQ6ZVH7 1005 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 PNMA8AQ86V59 439 aaPredicted RBP6.42□□□□□ -1.38
CDH1-207ENST00000564745 NME9Q86XW9 330 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 SMARCC2Q8TAQ2 1214 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 JPH3Q8WXH2 748 aaPredicted RBP6.42□□□□□ -1.38
CDH1-207ENST00000564745 MAML3Q96JK9 1138 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 ORAI2Q96SN7 254 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 SLC13A1Q9BZW2 595 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 MCOLN1Q9GZU1 580 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 INCENPQ9NQS7 918 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 DNAJC28Q9NX36 388 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 USP36Q9P275 1121 aaKnown RBP6.42□□□□□ -1.38
CDH1-207ENST00000564745 MBD1Q9UIS9 605 aaPredicted RBP6.42□□□□□ -1.38
CDH1-207ENST00000564745 ZNF180Q9UJW8 692 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 TMPRSS11EQ9UL52 423 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 FAN1Q9Y2M0 1017 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 PCDHA5Q9Y5H7 936 aa6.42□□□□□ -1.38
CDH1-207ENST00000564745 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.42□□□□□ -1.38
CDH1-207ENST00000564745 TRIM75PA6NK02 468 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 HRKO00198 91 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 ENO2P09104 434 aaPredicted RBP6.41□□□□□ -1.38
CDH1-207ENST00000564745 NCAM1P13591 858 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 OSMP13725 252 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 ENPP1P22413 925 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 GLRBP48167 497 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 HTRA3P83110 453 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 NOLC1Q14978 699 aaKnown RBP eCLIP6.41□□□□□ -1.38
CDH1-207ENST00000564745 FSCN1Q16658 493 aaKnown RBP6.41□□□□□ -1.38
CDH1-207ENST00000564745 SKIDA1Q1XH10 827 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 VASNQ6EMK4 673 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 SLFN12LQ6IEE8 588 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 LYSMD2Q8IV50 215 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 TPH2Q8IWU9 490 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 CHPFQ8IZ52 775 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 DTX3Q8N9I9 347 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 CPA5Q8WXQ8 436 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 JADE3Q92613 823 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 ZSWIM3Q96MP5 696 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 ACAP3Q96P50 834 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 SLC2A13Q96QE2 648 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 FOXB1Q99853 325 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 SIRT5Q9NXA8 310 aa6.41□□□□□ -1.38
CDH1-207ENST00000564745 SNUPNO95149 360 aaKnown RBP6.4□□□□□ -1.38
CDH1-207ENST00000564745 IL18BPO95998 194 aa6.4□□□□□ -1.38
CDH1-207ENST00000564745 CFBP00751 764 aa6.4□□□□□ -1.38
CDH1-207ENST00000564745 ADCY2Q08462 1091 aa6.4□□□□□ -1.38
CDH1-207ENST00000564745 TRIM25Q14258 630 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms