RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 ANKEF1Q9NU02 776 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 BLOC1S4Q9NUP1 217 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 HPSEQ9Y251 543 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 MYH9P35579 1960 aaKnown RBP17.33■□□□□ 0.37
CDH11-209ENST00000564317 COL1A2P08123 1366 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 FAM237AA0A1B0GTK4 181 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 A0A1B0GVL5 298 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 C17orf102A2RUQ5 167 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 RARRES1P49788 294 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 ADAM17P78536 824 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 PTPN11Q06124 597 aaPredicted RBP17.33■□□□□ 0.36
CDH11-209ENST00000564317 E2F4Q16254 413 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 LRRC26Q2I0M4 334 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 TRIM60Q495X7 471 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 NAALADL2Q58DX5 795 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 ZNF484Q5JVG2 852 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 PDILTQ8N807 584 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 MRPS27Q92552 414 aaKnown RBP17.33■□□□□ 0.36
CDH11-209ENST00000564317 GBP4Q96PP9 640 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 CTAGE1Q96RT6 745 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 NT5C3AQ9H0P0 336 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 CYP26B1Q9NR63 512 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 TRMT13Q9NUP7 481 aaKnown RBP17.33■□□□□ 0.36
CDH11-209ENST00000564317 FAM13BQ9NYF5 915 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 CCDC39Q9UFE4 941 aa17.33■□□□□ 0.36
CDH11-209ENST00000564317 DBR1Q9UK59 544 aaKnown RBP17.33■□□□□ 0.36
CDH11-209ENST00000564317 NRCAMQ92823 1304 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 PRPF40AO75400 957 aaKnown RBP17.32■□□□□ 0.36
CDH11-209ENST00000564317 C22orf31O95567 290 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 EYA4O95677 639 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 XRCC6P12956 609 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDH11-209ENST00000564317 NDUFA8P51970 172 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 XKR9Q5GH70 373 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 C1orf53Q5VUE5 145 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 RRAGBQ5VZM2 374 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 FAM126BQ8IXS8 530 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 RAD54LQ92698 747 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 TRPV6Q9H1D0 765 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 BHMT2Q9H2M3 363 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 KCNH3Q9ULD8 1083 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 DNM3Q9UQ16 869 aa17.32■□□□□ 0.36
CDH11-209ENST00000564317 ARID2Q68CP9 1835 aa17.31■□□□□ 0.36
CDH11-209ENST00000564317 MBLAC1A4D2B0 266 aaPredicted RBP17.31■□□□□ 0.36
CDH11-209ENST00000564317 RRN3P2A6NIE6 340 aa17.31■□□□□ 0.36
CDH11-209ENST00000564317 TREHO43280 583 aa17.31■□□□□ 0.36
CDH11-209ENST00000564317 B4GALT4O60513 344 aa17.31■□□□□ 0.36
CDH11-209ENST00000564317 RTP1P59025 263 aa17.31■□□□□ 0.36
CDH11-209ENST00000564317 MTHFD1LQ6UB35 978 aa17.31■□□□□ 0.36
CDH11-209ENST00000564317 RUFY4Q6ZNE9 571 aa17.31■□□□□ 0.36
CDH11-209ENST00000564317 CCDC73Q6ZRK6 1079 aa17.31■□□□□ 0.36
CDH11-209ENST00000564317 OTUD6AQ7L8S5 288 aa17.31■□□□□ 0.36
CDH11-209ENST00000564317 DHX58Q96C10 678 aa17.31■□□□□ 0.36
CDH11-209ENST00000564317 BMP2KQ9NSY1 1161 aaPredicted RBP17.31■□□□□ 0.36
CDH11-209ENST00000564317 ARHGEF35A5YM69 484 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 GOLGA6L4A6NEF3 574 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 POLR2DO15514 142 aaKnown RBP17.3■□□□□ 0.36
CDH11-209ENST00000564317 PQBP1O60828 265 aaKnown RBP17.3■□□□□ 0.36
CDH11-209ENST00000564317 PLA2G4BP0C869 781 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 KLRC1P26715 233 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 STAT6P42226 847 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 SLC12A3P55017 1021 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 MCM6Q14566 821 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 PTGISQ16647 500 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 ANKRD33Q7Z3H0 272 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 KCTD17Q8N5Z5 321 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 WNT8BQ93098 351 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 SEZ6LQ9BYH1 1024 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 XPNPEP1Q9NQW7 623 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 LMBRD1Q9NUN5 540 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 STK17AQ9UEE5 414 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 TUBE1Q9UJT0 475 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 ATP11BQ9Y2G3 1177 aa17.3■□□□□ 0.36
CDH11-209ENST00000564317 USO1O60763 962 aaKnown RBP17.29■□□□□ 0.36
CDH11-209ENST00000564317 CD4P01730 458 aa17.29■□□□□ 0.36
CDH11-209ENST00000564317 SSBP05455 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
CDH11-209ENST00000564317 LIG1P18858 919 aa17.29■□□□□ 0.36
CDH11-209ENST00000564317 TLE2Q04725 743 aa17.29■□□□□ 0.36
CDH11-209ENST00000564317 TBC1D8BQ0IIM8 1120 aa17.29■□□□□ 0.36
CDH11-209ENST00000564317 PADI6Q6TGC4 694 aa17.29■□□□□ 0.36
CDH11-209ENST00000564317 LINC01465Q8N7H1 131 aa17.29■□□□□ 0.36
CDH11-209ENST00000564317 SYT2Q8N9I0 419 aaPredicted RBP17.29■□□□□ 0.36
CDH11-209ENST00000564317 LARP4BQ92615 738 aaKnown RBP17.29■□□□□ 0.36
CDH11-209ENST00000564317 DHX38Q92620 1227 aaKnown RBP17.29■□□□□ 0.36
CDH11-209ENST00000564317 CCDC43Q96MW1 224 aaKnown RBP17.29■□□□□ 0.36
CDH11-209ENST00000564317 RUSC1Q9BVN2 902 aa17.29■□□□□ 0.36
CDH11-209ENST00000564317 DHX33Q9H6R0 707 aaKnown RBP17.29■□□□□ 0.36
CDH11-209ENST00000564317 IGKV6-21A0A0C4DH24 114 aa17.28■□□□□ 0.36
CDH11-209ENST00000564317 ACTN4O43707 911 aaKnown RBP17.28■□□□□ 0.36
CDH11-209ENST00000564317 MAFO75444 373 aaPredicted RBP17.28■□□□□ 0.36
CDH11-209ENST00000564317 GNAT1P11488 350 aa17.28■□□□□ 0.36
CDH11-209ENST00000564317 RFC5P40937 340 aa17.28■□□□□ 0.36
CDH11-209ENST00000564317 SYKP43405 635 aa17.28■□□□□ 0.36
CDH11-209ENST00000564317 UBE2HP62256 183 aa17.28■□□□□ 0.36
CDH11-209ENST00000564317 MKRN4PQ13434 485 aaPredicted RBP17.28■□□□□ 0.36
CDH11-209ENST00000564317 DRP2Q13474 957 aa17.28■□□□□ 0.36
CDH11-209ENST00000564317 DHX8Q14562 1220 aaKnown RBP17.28■□□□□ 0.36
CDH11-209ENST00000564317 EMC2Q15006 297 aa17.28■□□□□ 0.36
CDH11-209ENST00000564317 SERINC5Q86VE9 423 aa17.28■□□□□ 0.36
CDH11-209ENST00000564317 FMR1NBQ8N0W7 255 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms