RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 CAPN6Q9Y6Q1 641 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 GCOM1H8Y6P7 765 aaPredicted RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 CTNND1O60716 968 aaKnown RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 HEXIM1O94992 359 aaKnown RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 SNUPNO95149 360 aaKnown RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 SSBP05455 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
TCF4-222ENST00000564228 MYZAPP0CAP1 466 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 CASP1P29466 404 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 CARSP49589 748 aaKnown RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 ZYXQ15942 572 aaKnown RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 KCTD1Q719H9 257 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 PNMA8AQ86V59 439 aaPredicted RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 ACER1Q8TDN7 264 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 ZC3H15Q8WU90 426 aaKnown RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 SPDL1Q96EA4 605 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 MOV10L1Q9BXT6 1211 aaKnown RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 RBM12Q9NTZ6 932 aaKnown RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 EXOC1Q9NV70 894 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 MAGEC2Q9UBF1 373 aaPredicted RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 LRWD1Q9UFC0 647 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 CORO1CQ9ULV4 474 aaPredicted RBP12.09□□□□□ -0.47
TCF4-222ENST00000564228 PLAAQ9Y263 795 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 DUSP10Q9Y6W6 482 aa12.09□□□□□ -0.47
TCF4-222ENST00000564228 PHIPQ8WWQ0 1821 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 FRMD3A2A2Y4 597 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 F5H6K3 240 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
TCF4-222ENST00000564228 GLI1P08151 1106 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 FAM153BP0C7A2 387 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 PRPHP41219 470 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 SLC1A4P43007 532 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 KLRC3Q07444 240 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 ZNF543Q08ER8 600 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 TRAF1Q13077 416 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 NR5A1Q13285 461 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 FAM153CQ494X1 144 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 SLFN13Q68D06 897 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 NFRKBQ6P4R8 1299 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 BZW1Q7L1Q6 419 aaKnown RBP12.08□□□□□ -0.48
TCF4-222ENST00000564228 SPICE1Q8N0Z3 855 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 ADSSL1Q8N142 457 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 NSMCE1Q8WV22 266 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 IFIH1Q9BYX4 1025 aaKnown RBP12.08□□□□□ -0.48
TCF4-222ENST00000564228 GLIS2Q9BZE0 524 aaPredicted RBP12.08□□□□□ -0.48
TCF4-222ENST00000564228 RRAGCQ9HB90 399 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 VPS54Q9P1Q0 977 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 FAM153AQ9UHL3 310 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 PCDHA13Q9Y5I0 950 aa12.08□□□□□ -0.48
TCF4-222ENST00000564228 CYTH3O43739 400 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 PPP1R12BO60237 982 aaPredicted RBP12.07□□□□□ -0.48
TCF4-222ENST00000564228 SMNDC1O75940 238 aaKnown RBP eCLIP12.07□□□□□ -0.48
TCF4-222ENST00000564228 RPN1P04843 607 aaKnown RBP12.07□□□□□ -0.48
TCF4-222ENST00000564228 SNHG28P0DPA3 235 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 TRIM21P19474 475 aaKnown RBP12.07□□□□□ -0.48
TCF4-222ENST00000564228 MATR3P43243 847 aaKnown RBP eCLIP12.07□□□□□ -0.48
TCF4-222ENST00000564228 PPP2R2AP63151 447 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 PKN1Q16512 942 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 QPCTQ16769 361 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 SLC35G1Q2M3R5 365 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 ACCSLQ4AC99 568 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 CAPRIN2Q6IMN6 1127 aaKnown RBP12.07□□□□□ -0.48
TCF4-222ENST00000564228 MAATS1Q7Z4T9 603 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 RNF10Q8N5U6 811 aaKnown RBP12.07□□□□□ -0.48
TCF4-222ENST00000564228 KCNV2Q8TDN2 545 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 CENPTQ96BT3 561 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 CCDC42Q96M95 316 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 ANKRD27Q96NW4 1050 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 KIF9Q9HAQ2 790 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 EPB41L5Q9HCM4 733 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 SLC39A2Q9NP94 309 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 NOP53Q9NZM5 478 aaKnown RBP12.07□□□□□ -0.48
TCF4-222ENST00000564228 OPLAHO14841 1288 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 ZNF263O14978 683 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 NDUFB10O96000 172 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 RPSAP08865 295 aaKnown RBP12.07□□□□□ -0.48
TCF4-222ENST00000564228 MYBP10242 640 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 ALADP13716 330 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 IBSPP21815 317 aaPredicted RBP12.07□□□□□ -0.48
TCF4-222ENST00000564228 SLC16A2P36021 539 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 GUCY2DQ02846 1103 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 GPATCH4Q5T3I0 446 aaKnown RBP12.07□□□□□ -0.48
TCF4-222ENST00000564228 TTBK2Q6IQ55 1244 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 MIS18BP1Q6P0N0 1132 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 GMCL1P1Q8NEA9 526 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 CASKIN2Q8WXE0 1202 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 LRRC45Q96CN5 670 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 KLRG1Q96E93 195 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 CDCA5Q96FF9 252 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 ERGIC2Q96RQ1 377 aa12.07□□□□□ -0.48
TCF4-222ENST00000564228 HINFPQ9BQA5 517 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms