RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 CCDC74AQ96AQ1 378 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 ASIC4Q96FT7 647 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 NUP88Q99567 741 aaPredicted RBP8.68□□□□□ -1.02
TCF4-221ENST00000563888 RAVER2Q9HCJ3 691 aaKnown RBP8.68□□□□□ -1.02
TCF4-221ENST00000563888 HOMER2Q9NSB8 354 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 CD207Q9UJ71 328 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 PRR12Q9ULL5 1215 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 INSL6Q9Y581 213 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.68□□□□□ -1.02
TCF4-221ENST00000563888 SPTBN2O15020 2390 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 NCK2O43639 380 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 ZBED4O75132 1171 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 IDH1O75874 414 aaKnown RBP8.67□□□□□ -1.02
TCF4-221ENST00000563888 PSAPP07602 524 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 CYP2D6P10635 497 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 EEF2P13639 858 aaKnown RBP8.67□□□□□ -1.02
TCF4-221ENST00000563888 GNA15P30679 374 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 GTF2F1P35269 517 aaKnown RBP eCLIP8.67□□□□□ -1.02
TCF4-221ENST00000563888 DAB2P98082 770 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 HYAL1Q12794 435 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 UBAP2LQ14157 1087 aaKnown RBP8.67□□□□□ -1.02
TCF4-221ENST00000563888 GPNMBQ14956 572 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.67□□□□□ -1.02
TCF4-221ENST00000563888 CNKSR3Q6P9H4 555 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.67□□□□□ -1.02
TCF4-221ENST00000563888 KIAA1211Q6ZU35 1233 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 FBXO16Q8IX29 292 aaPredicted RBP8.67□□□□□ -1.02
TCF4-221ENST00000563888 KIAA2013Q8IYS2 634 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 DYNLL2Q96FJ2 89 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 RPGRIP1Q96KN7 1286 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 SLF1Q9BQI6 1058 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 MTG1Q9BT17 334 aaPredicted RBP8.67□□□□□ -1.02
TCF4-221ENST00000563888 MCM9Q9NXL9 1143 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 CNTN3Q9P232 1028 aa8.67□□□□□ -1.02
TCF4-221ENST00000563888 ABHD14A-ACY1A0A1B0GW23 586 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 H3BNC9 293 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 LINC01565O15544 149 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 GADD45BO75293 160 aaPredicted RBP8.66□□□□□ -1.02
TCF4-221ENST00000563888 NFKB1P19838 968 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 FGFR3P22607 806 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 PURAQ00577 322 aaKnown RBP8.66□□□□□ -1.02
TCF4-221ENST00000563888 GABPAQ06546 454 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 IKBKEQ14164 716 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 ST3GAL2Q16842 350 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 IQSEC1Q6DN90 963 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 WDR63Q8IWG1 891 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 MYOCDQ8IZQ8 938 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 INCENPQ9NQS7 918 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 PPP4R2Q9NY27 417 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 NXF1Q9UBU9 619 aaKnown RBP8.66□□□□□ -1.02
TCF4-221ENST00000563888 ZNFX1Q9P2E3 1918 aaKnown RBP8.66□□□□□ -1.02
TCF4-221ENST00000563888 USP24Q9UPU5 2620 aa8.66□□□□□ -1.02
TCF4-221ENST00000563888 SCN5AQ14524 2016 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 ASB14A6NK59 587 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 LOC730098B7Z3J9 87 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 EREGO14944 169 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 SRGAP3O43295 1099 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 MMP20O60882 483 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 NBNO60934 754 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 TBX10O75333 385 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 SELPP16109 830 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 NDUFV1P49821 464 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 PTGISQ16647 500 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 LRRFIP1Q32MZ4 808 aaKnown RBP8.65□□□□□ -1.02
TCF4-221ENST00000563888 CCDC158Q5M9N0 1113 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 TAPT1Q6NXT6 567 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 NPAS3Q8IXF0 933 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 TMEM192Q8IY95 271 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 EPS8L3Q8TE67 593 aaKnown RBP8.65□□□□□ -1.02
TCF4-221ENST00000563888 NDFIP2Q9NV92 336 aa8.65□□□□□ -1.02
TCF4-221ENST00000563888 CEP250Q9BV73 2442 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 PTPRCP08575 1304 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 GIPC1O14908 333 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 AMHP03971 560 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 EDN3P14138 238 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 EIF4BP23588 611 aaKnown RBP8.64□□□□□ -1.03
TCF4-221ENST00000563888 CPT1AP50416 773 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 PUM1Q14671 1186 aaKnown RBP eCLIP8.64□□□□□ -1.03
TCF4-221ENST00000563888 MCTP2Q6DN12 878 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 NFRKBQ6P4R8 1299 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 LRRC8DQ7L1W4 858 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 TMEM105Q8N8V8 129 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 FAM133AQ8N9E0 248 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 PRPF38AQ8NAV1 312 aaKnown RBP8.64□□□□□ -1.03
TCF4-221ENST00000563888 TMEM87AQ8NBN3 555 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 AFAP1L1Q8TED9 768 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 RIPOR3Q96MK2 946 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 YME1L1Q96TA2 773 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 BACH2Q9BYV9 841 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 RNF19AQ9NV58 838 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 FBXO40Q9UH90 709 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 Q9Y3F1 56 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 AK5Q9Y6K8 562 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 MAP1BP46821 2468 aaKnown RBP8.64□□□□□ -1.03
TCF4-221ENST00000563888 PLXNA3P51805 1871 aa8.64□□□□□ -1.03
TCF4-221ENST00000563888 WIPF1O43516 503 aa8.63□□□□□ -1.03
TCF4-221ENST00000563888 EFCAB14O75071 495 aa8.63□□□□□ -1.03
TCF4-221ENST00000563888 TCF3P15923 654 aa8.63□□□□□ -1.03
TCF4-221ENST00000563888 RRP1P56182 461 aaKnown RBP8.63□□□□□ -1.03
TCF4-221ENST00000563888 PLAURQ03405 335 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms