RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ZBTB48P10074 688 aaPredicted RBP6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 ATP1A3P13637 1013 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 GPR3P46089 330 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 GPLD1P80108 840 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 PLAURQ03405 335 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 HYAL2Q12891 473 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 TRAPPC3LQ5T215 181 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 PSAPL1Q6NUJ1 521 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 ELMSAN1Q6PJG2 1045 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 C4orf50Q6ZRC1 276 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 PDZD3Q86UT5 571 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 COL23A1Q86Y22 540 aaPredicted RBP6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 IGSF22Q8N9C0 903 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 FLCNQ8NFG4 579 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 JADE3Q92613 823 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 TRIM11Q96F44 468 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 PLPPR2Q96GM1 343 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 TMEM169Q96HH4 297 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 SLC6A18Q96N87 628 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 NSUN5Q96P11 429 aaKnown RBP6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 NUDT16L1Q9BRJ7 211 aaKnown RBP6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 CERS4Q9HA82 394 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 ATP6V0A4Q9HBG4 840 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 FRRS1LQ9P0K9 344 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 CEP72Q9P209 647 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 ARHGAP28Q9P2N2 729 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 SYNMO15061 1565 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 MYOM2P54296 1465 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 FAM170AA1A519 330 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 PABPN1LA6NDY0 278 aaKnown RBP6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 PDE2AO00408 941 aaPredicted RBP6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 TUSC2O75896 110 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 NAT2P11245 290 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 CPB1P15086 417 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 PEX2P28328 305 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 PMS1P54277 932 aaKnown RBP6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 SESN3P58005 492 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 RAC1P63000 192 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 TMF1P82094 1093 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 DGKKQ5KSL6 1271 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 BROXQ5VW32 411 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 LRFN4Q6PJG9 635 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 C20orf204Q6ZNR8 217 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 ADAT2Q7Z6V5 191 aaKnown RBP6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 DDX53Q86TM3 631 aaKnown RBP6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 FTSJ3Q8IY81 847 aaKnown RBP6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 NUDT8Q8WV74 236 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 SLC5A5Q92911 643 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 BRF1Q92994 677 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 ATP6V1E2Q96A05 226 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 MRGPRX3Q96LB0 322 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 KLHL25Q9H0H3 589 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 CLEC4MQ9H2X3 399 aaPredicted RBP6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 TLR7Q9NYK1 1049 aaKnown RBP6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 GIMAP2Q9UG22 337 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 PCDHA4Q9UN74 947 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 JAG2Q9Y219 1238 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 ZKSCAN5Q9Y2L8 839 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 PCDHA8Q9Y5H6 950 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 SNX5Q9Y5X3 404 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 EVC2Q86UK5 1308 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 PIK3C2BO00750 1634 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 SPATA31E1Q6ZUB1 1445 aa6.01□□□□□ -1.45
VPS35P1-201ENST00000563400 LOC102724428A0A0B4J2F2 783 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 SMTNL1A8MU46 457 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 B3GALT4O96024 378 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 POLBP06746 335 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 POU2F2P09086 479 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 CNTFP26441 200 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 KPNA1P52294 538 aaPredicted RBP6□□□□□ -1.45
VPS35P1-201ENST00000563400 SIK1P57059 783 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 PCDH1Q08174 1060 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 KIF22Q14807 665 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 TAF5Q15542 800 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 DDB1Q16531 1140 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 PRSS53Q2L4Q9 553 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 BBS9Q3SYG4 887 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 SLC10A5Q5PT55 438 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 DCAF15Q66K64 600 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 DARS2Q6PI48 645 aaKnown RBP6□□□□□ -1.45
VPS35P1-201ENST00000563400 C11orf74Q86VG3 221 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 HEATR4Q86WZ0 1026 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 MAP4K3Q8IVH8 894 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 CAMKK1Q8N5S9 505 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 BVESQ8NE79 360 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 IPCEF1Q8WWN9 437 aaPredicted RBP6□□□□□ -1.45
VPS35P1-201ENST00000563400 CCDC47Q96A33 483 aaKnown RBP6□□□□□ -1.45
VPS35P1-201ENST00000563400 SIN3AQ96ST3 1273 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 TTLL2Q9BWV7 592 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 EMILIN2Q9BXX0 1053 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 B3GNT5Q9BYG0 378 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 ZC3H12CQ9C0D7 883 aaKnown RBP6□□□□□ -1.45
VPS35P1-201ENST00000563400 TMEM60Q9H2L4 133 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 RASSF4Q9H2L5 321 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 UNC45AQ9H3U1 944 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 CXorf56Q9H5V9 222 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 DMRT3Q9NQL9 472 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 NKIRAS2Q9NYR9 191 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 STK26Q9P289 416 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 GRHPRQ9UBQ7 328 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms