RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 BHMT2Q9H2M3 363 aa5.28□□□□□ -1.56
SMG1-207ENST00000563235 VEZTQ9HBM0 779 aa5.28□□□□□ -1.56
SMG1-207ENST00000563235 PRDM5Q9NQX1 630 aaPredicted RBP5.28□□□□□ -1.56
SMG1-207ENST00000563235 PICK1Q9NRD5 415 aa5.28□□□□□ -1.56
SMG1-207ENST00000563235 OLA1Q9NTK5 396 aaKnown RBP5.28□□□□□ -1.56
SMG1-207ENST00000563235 PTBP2Q9UKA9 531 aaKnown RBP5.28□□□□□ -1.56
SMG1-207ENST00000563235 RTCBQ9Y3I0 505 aaKnown RBP5.28□□□□□ -1.56
SMG1-207ENST00000563235 A0A0G2JS52 829 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 UPK3BL1B0FP48 263 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 UPK3BL2E5RIL1 263 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 SMC2O95347 1197 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 ZSCAN22P10073 491 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 IDUAP35475 653 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 SMTNP53814 917 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 ERVK-21P61565 698 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 BNIP1Q12981 228 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 NEDD9Q14511 834 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 LBRQ14739 615 aaKnown RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 DHCR24Q15392 516 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 SURF1Q15526 300 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 GNPTABQ3T906 1256 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 VARS2Q5ST30 1063 aaKnown RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 MEX3CQ5U5Q3 659 aaKnown RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 RNF20Q5VTR2 975 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 COL23A1Q86Y22 540 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 TNS4Q8IZW8 715 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 ZBTB44Q8NCP5 570 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 SIMC1Q8NDZ2 872 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 RUNDC3BQ96NL0 473 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 TTC1Q99614 292 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 LRRCC1Q9C099 1032 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 GGNBP2Q9H3C7 697 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 SUFUQ9UMX1 484 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PTPRGP23470 1445 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 UBXN8O00124 270 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 NDC80O14777 642 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 TLR3O15455 904 aaKnown RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 PCDHGA12O60330 932 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 URI1O94763 535 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 ENDOD1O94919 500 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 STARD3NLO95772 234 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 ZBTB48P10074 688 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 ASMTP46597 345 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 NEK4P51957 841 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 USP46P62068 366 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 GALNT1Q10472 559 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 POSTNQ15063 836 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 SYCP1Q15431 976 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 CCDC85BQ15834 202 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 PROSER3Q2NL68 480 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 C5orf22Q49AR2 442 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PTRH1Q86Y79 214 aaKnown RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 FRAT1Q92837 279 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 FERMT2Q96AC1 680 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 CDCA7LQ96GN5 454 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 COG3Q96JB2 828 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 YME1L1Q96TA2 773 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 TRIM7Q9C029 511 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 B3GNT4Q9C0J1 378 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 TMEM134Q9H6X4 195 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 ARFGAP3Q9NP61 516 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 NSMCE4AQ9NXX6 385 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 GIT1Q9Y2X7 761 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PCDHGA9Q9Y5G4 932 aaKnown RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 PCDHGA8Q9Y5G5 932 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PCDHGA7Q9Y5G6 932 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PCDHGA6Q9Y5G7 932 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PCDHGA3Q9Y5H0 932 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PCDHGA2Q9Y5H1 932 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 SLC4A4Q9Y6R1 1079 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 FRMPD1Q5SYB0 1578 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 CFAP65Q6ZU64 1925 aaKnown RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 BIN1O00499 593 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PLD2O14939 933 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 THAP12O43422 761 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 MYCP01106 439 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 PF4P02776 101 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PDHA1P08559 390 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 EEF2P13639 858 aaKnown RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 GAP43P17677 238 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 RECQLP46063 649 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 TKTL1P51854 596 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 CCDC173Q0VFZ6 552 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 TAF12Q16514 161 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 TAOK1Q7L7X3 1001 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PPFIBP1Q86W92 1011 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 LSRQ86X29 649 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 CREG2Q8IUH2 290 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 TRIM42Q8IWZ5 723 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 FAM178BQ8IXR5 827 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PPM1KQ8N3J5 372 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 AADATQ8N5Z0 425 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 PLBD2Q8NHP8 589 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 DCAF11Q8TEB1 546 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 CTNNBL1Q8WYA6 563 aaPredicted RBP5.27□□□□□ -1.57
SMG1-207ENST00000563235 FNBP1Q96RU3 617 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 CARD11Q9BXL7 1154 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 TNMDQ9H2S6 317 aa5.27□□□□□ -1.57
SMG1-207ENST00000563235 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms