RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 SLC9A7Q96T83 725 aa13□□□□□ -0.33
FANCA-209ENST00000562424 UPF2Q9HAU5 1272 aaKnown RBP13□□□□□ -0.33
FANCA-209ENST00000562424 SH2B1Q9NRF2 756 aaPredicted RBP13□□□□□ -0.33
FANCA-209ENST00000562424 MSRAQ9UJ68 235 aa13□□□□□ -0.33
FANCA-209ENST00000562424 PCDHA10Q9Y5I2 948 aa13□□□□□ -0.33
FANCA-209ENST00000562424 MAFBQ9Y5Q3 323 aaPredicted RBP13□□□□□ -0.33
FANCA-209ENST00000562424 COL1A2P08123 1366 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 EFCAB14O75071 495 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 MMP1P03956 469 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 RPLP2P05387 115 aaKnown RBP12.99□□□□□ -0.33
FANCA-209ENST00000562424 GCFC2P16383 781 aaKnown RBP12.99□□□□□ -0.33
FANCA-209ENST00000562424 ATP4AP20648 1035 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 KRT2P35908 639 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 WDR5P61964 334 aaKnown RBP12.99□□□□□ -0.33
FANCA-209ENST00000562424 NR5A1Q13285 461 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 RABEP1Q15276 862 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 TCTN1Q2MV58 587 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 LETM2Q2VYF4 491 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 PLEKHG4Q58EX7 1191 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 LRCH2Q5VUJ6 765 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 PPP4R3AQ6IN85 833 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 PIK3AP1Q6ZUJ8 805 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 NEK8Q86SG6 692 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 RSPH3Q86UC2 560 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 ETNPPLQ8TBG4 499 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 TRAPPC12Q8WVT3 735 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 DNAJB3Q8WWF6 145 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 TNFRSF25Q93038 417 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 LLPHQ9BRT6 129 aaKnown RBP12.99□□□□□ -0.33
FANCA-209ENST00000562424 TEKT3Q9BXF9 490 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 ZNF576Q9H609 170 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 BRMS1Q9HCU9 246 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 DISC1Q9NRI5 854 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 DDX25Q9UHL0 483 aaKnown RBP12.99□□□□□ -0.33
FANCA-209ENST00000562424 SAMM50Q9Y512 469 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 PCDHA11Q9Y5I1 949 aa12.99□□□□□ -0.33
FANCA-209ENST00000562424 IGSF9BQ9UPX0 1349 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 SLC37A4O43826 429 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 CHRNA1P02708 482 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 SFNP31947 248 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 KCNJ6P48051 423 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 JAK3P52333 1124 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 RABGGTBP53611 331 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 MGAT3Q09327 533 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 TRIM29Q14134 588 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 IKBKEQ14164 716 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 EARS2Q5JPH6 523 aaKnown RBP12.98□□□□□ -0.33
FANCA-209ENST00000562424 KRT40Q6A162 431 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 B3GNT9Q6UX72 402 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 IL27Q8NEV9 243 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 DBF4BQ8NFT6 615 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 RDM1Q8NG50 284 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 GJA10Q969M2 543 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 ZBTB10Q96DT7 871 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 NAP1L4Q99733 375 aaKnown RBP12.98□□□□□ -0.33
FANCA-209ENST00000562424 OSBPL7Q9BZF2 842 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 UNC45AQ9H3U1 944 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 GABBR1Q9UBS5 961 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 YBX2Q9Y2T7 364 aaKnown RBP12.98□□□□□ -0.33
FANCA-209ENST00000562424 PCDHA2Q9Y5H9 948 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 CHD7Q9P2D1 2997 aa12.98□□□□□ -0.33
FANCA-209ENST00000562424 SMIM35A0A1B0GVV1 85 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 FAM205CA6NFA0 338 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 ZBTB42B2RXF5 422 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 RBAK-RBAKDNI3L0D1 243 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 CHMP2AO43633 222 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 KLRC1P26715 233 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 ZNF484Q5JVG2 852 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 MTHFD1LQ6UB35 978 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 HERC6Q8IVU3 1022 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 CKAP2LQ8IYA6 745 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
FANCA-209ENST00000562424 SEPT8Q92599 483 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 FAM167AQ96KS9 214 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 FAM20AQ96MK3 541 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 FAM49AQ9H0Q0 323 aaPredicted RBP12.97□□□□□ -0.33
FANCA-209ENST00000562424 NKX2-4Q9H2Z4 354 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 SLC28A3Q9HAS3 691 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 KCNMB3Q9NPA1 279 aa12.97□□□□□ -0.33
FANCA-209ENST00000562424 BTBD18B2RXH4 712 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 TBX3O15119 743 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 ST18O60284 1047 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 ZNF862O60290 1169 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 CCNT1O60563 726 aaKnown RBP12.96□□□□□ -0.33
FANCA-209ENST00000562424 MYOGP15173 224 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 FOSBP53539 338 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 DEFB103AP81534 67 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 MRPS6P82932 125 aaKnown RBP12.96□□□□□ -0.33
FANCA-209ENST00000562424 HMGN5P82970 282 aaKnown RBP12.96□□□□□ -0.33
FANCA-209ENST00000562424 TJAP1Q5JTD0 557 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 MIER3Q7Z3K6 550 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 USP38Q8NB14 1042 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 APBB2Q92870 758 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 TBC1D32Q96NH3 1257 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 IFIH1Q9BYX4 1025 aaKnown RBP12.96□□□□□ -0.33
FANCA-209ENST00000562424 CDY2AQ9Y6F7 541 aa12.96□□□□□ -0.33
FANCA-209ENST00000562424 TTC3P53804 2025 aa12.96□□□□□ -0.34
FANCA-209ENST00000562424 MUC3AQ02505 3323 aa12.96□□□□□ -0.34
FANCA-209ENST00000562424 KIF28PB7ZC32 967 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms