RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 GALNT17Q6IS24 598 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 TMEM192Q8IY95 271 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 DAGLBQ8NCG7 672 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 LINC01599Q8WXQ3 324 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 SLC5A5Q92911 643 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 RIT2Q99578 217 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 C22orf23Q9BZE7 217 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 SLKQ9H2G2 1235 aaPredicted RBP11.64□□□□□ -0.55
CLK3-205ENST00000561673 DISC1Q9NRI5 854 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 TCEAL9Q9UHQ7 104 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 KCNJ14Q9UNX9 436 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 PRRC2BQ5JSZ5 2229 aaKnown RBP11.64□□□□□ -0.55
CLK3-205ENST00000561673 COL1A2P08123 1366 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 MICAL3Q7RTP6 2002 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 KAT6AQ92794 2004 aa11.64□□□□□ -0.55
CLK3-205ENST00000561673 KDM3AQ9Y4C1 1321 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 WDR64B1ANS9 1081 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 H3BNC9 293 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 GAS7O60861 476 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 CDKL5O76039 1030 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 C22orf31O95567 290 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 BMP1P13497 986 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 PAK2Q13177 524 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 TMEM266Q2M3C6 531 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 LRCH2Q5VUJ6 765 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 FAM177A1Q8N128 213 aaPredicted RBP11.63□□□□□ -0.55
CLK3-205ENST00000561673 CRIPAKQ8N1N5 446 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 FIBCD1Q8N539 461 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 ADAMTS19Q8TE59 1207 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 HLA-CQ95604 372 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 ZNF689Q96CS4 500 aaPredicted RBP11.63□□□□□ -0.55
CLK3-205ENST00000561673 SAMD11Q96NU1 681 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 PHF20Q9BVI0 1012 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 FTHL17Q9BXU8 183 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 TMX1Q9H3N1 280 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 UNC45AQ9H3U1 944 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 RC3H2Q9HBD1 1191 aaKnown RBP11.63□□□□□ -0.55
CLK3-205ENST00000561673 COG5Q9UP83 839 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 GINS2Q9Y248 185 aa11.63□□□□□ -0.55
CLK3-205ENST00000561673 CHMP2AO43633 222 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 ZNF862O60290 1169 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 GPR32O75388 356 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 PSMD10O75832 226 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 DGKIO75912 1065 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 CTDNEP1O95476 244 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 TDP2O95551 362 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 LINC00271P0C7V0 271 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 KCNQ1P51787 676 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 AK2P54819 239 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 NFX1Q12986 1120 aaKnown RBP11.62□□□□□ -0.55
CLK3-205ENST00000561673 GPM6BQ13491 265 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 NONOQ15233 471 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLK3-205ENST00000561673 ANKRD1Q15327 319 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 UGCGQ16739 394 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 AAK1Q2M2I8 961 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 KIZQ2M2Z5 673 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 METTL13Q8N6R0 699 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 IL27Q8NEV9 243 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 ETNPPLQ8TBG4 499 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 TMEM40Q8WWA1 233 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 MRPL38Q96DV4 380 aaKnown RBP11.62□□□□□ -0.55
CLK3-205ENST00000561673 MBOAT7Q96N66 472 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 PPP1R16BQ96T49 567 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 TEKT3Q9BXF9 490 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 NRBP2Q9NSY0 501 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 GJB4Q9NTQ9 266 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 NOC2LQ9Y3T9 749 aaKnown RBP11.62□□□□□ -0.55
CLK3-205ENST00000561673 TTC28Q96AY4 2481 aa11.62□□□□□ -0.55
CLK3-205ENST00000561673 SIP14410 1827 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 TNFRSF10AO00220 468 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 MAGEB2O15479 319 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 MGEA5O60502 916 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 RPS6KA5O75582 802 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 SEC24BO95487 1268 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 VTNP04004 478 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 OATP04181 439 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 SFNP31947 248 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 BMPR1AP36894 532 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 CLCN3P51790 818 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 JAK3P52333 1124 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 CRYBB1P53674 252 aaPredicted RBP11.61□□□□□ -0.55
CLK3-205ENST00000561673 PRKCEQ02156 737 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 BTG3Q14201 252 aaPredicted RBP11.61□□□□□ -0.55
CLK3-205ENST00000561673 PTPROQ16827 1216 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 INF2Q27J81 1249 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 EFCAB12Q6NXP0 572 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 B3GNT9Q6UX72 402 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 KRT25Q7Z3Z0 450 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 NECAB1Q8N987 351 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 CLP1Q92989 425 aaKnown RBP11.61□□□□□ -0.55
CLK3-205ENST00000561673 FAM167AQ96KS9 214 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 UHRF1Q96T88 793 aaPredicted RBP11.61□□□□□ -0.55
CLK3-205ENST00000561673 ERVK-5Q9HDB9 667 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 CIZ1Q9ULV3 898 aaPredicted RBP11.61□□□□□ -0.55
CLK3-205ENST00000561673 ST3GAL5Q9UNP4 418 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 CEP131Q9UPN4 1083 aa11.61□□□□□ -0.55
CLK3-205ENST00000561673 ADGRA3Q8IWK6 1321 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 STK36Q9NRP7 1315 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 COL4A4P53420 1690 aaPredicted RBP11.6□□□□□ -0.55
CLK3-205ENST00000561673 COL4A6Q14031 1691 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms