RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 YME1L1Q96TA2 773 aa28.68■■■□□ 2.18
NME3-202ENST00000561637 LTBRP36941 435 aa28.67■■■□□ 2.18
NME3-202ENST00000561637 TRMT1LQ7Z2T5 733 aaKnown RBP28.67■■■□□ 2.18
NME3-202ENST00000561637 BICD2Q8TD16 824 aa28.67■■■□□ 2.18
NME3-202ENST00000561637 NSUN3Q9H649 340 aaKnown RBP28.67■■■□□ 2.18
NME3-202ENST00000561637 ZNF302Q9NR11 478 aa28.67■■■□□ 2.18
NME3-202ENST00000561637 SH3GLB2Q9NR46 395 aa28.67■■■□□ 2.18
NME3-202ENST00000561637 GJB4Q9NTQ9 266 aa28.67■■■□□ 2.18
NME3-202ENST00000561637 CLDND1Q9NY35 253 aa28.67■■■□□ 2.18
NME3-202ENST00000561637 COL4A6Q14031 1691 aa28.67■■■□□ 2.18
NME3-202ENST00000561637 ZBTB42B2RXF5 422 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 DEXIO95424 95 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 SETQ01105 290 aaPredicted RBP28.66■■■□□ 2.18
NME3-202ENST00000561637 MCTP2Q6DN12 878 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 PDXDC2PQ6P474 469 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 MTHFD1LQ6UB35 978 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 HFE2Q6ZVN8 426 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 RSPH3Q86UC2 560 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 ATP8B4Q8TF62 1192 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 LINC01599Q8WXQ3 324 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 PRKAG3Q9UGI9 489 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 PCDHA4Q9UN74 947 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 KCNJ14Q9UNX9 436 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 PCDHA2Q9Y5H9 948 aa28.66■■■□□ 2.18
NME3-202ENST00000561637 M0R2N6 131 aa28.65■■■□□ 2.18
NME3-202ENST00000561637 MSH4O15457 936 aa28.65■■■□□ 2.18
NME3-202ENST00000561637 SEC24BO95487 1268 aa28.65■■■□□ 2.18
NME3-202ENST00000561637 CD52P31358 61 aa28.65■■■□□ 2.18
NME3-202ENST00000561637 IRS1P35568 1242 aa28.65■■■□□ 2.18
NME3-202ENST00000561637 MIS18BP1Q6P0N0 1132 aa28.65■■■□□ 2.18
NME3-202ENST00000561637 ADHFE1Q8IWW8 467 aa28.65■■■□□ 2.18
NME3-202ENST00000561637 TBCKQ8TEA7 893 aa28.65■■■□□ 2.18
NME3-202ENST00000561637 LARGE1O95461 756 aa28.64■■■□□ 2.18
NME3-202ENST00000561637 TDP2O95551 362 aa28.64■■■□□ 2.18
NME3-202ENST00000561637 AK2P54819 239 aa28.64■■■□□ 2.18
NME3-202ENST00000561637 FAM160B1Q5W0V3 765 aa28.64■■■□□ 2.18
NME3-202ENST00000561637 APBB2Q92870 758 aa28.64■■■□□ 2.18
NME3-202ENST00000561637 KCNH6Q9H252 994 aa28.64■■■□□ 2.18
NME3-202ENST00000561637 LOXHD1Q8IVV2 1947 aa28.64■■■□□ 2.18
NME3-202ENST00000561637 TECTAO75443 2155 aa28.63■■■□□ 2.17
NME3-202ENST00000561637 CTDNEP1O95476 244 aa28.63■■■□□ 2.17
NME3-202ENST00000561637 KLRC1P26715 233 aa28.63■■■□□ 2.17
NME3-202ENST00000561637 DLX2Q07687 328 aaPredicted RBP28.63■■■□□ 2.17
NME3-202ENST00000561637 ZNF746Q6NUN9 644 aaPredicted RBP28.63■■■□□ 2.17
NME3-202ENST00000561637 BLIDQ8IZY5 108 aa28.63■■■□□ 2.17
NME3-202ENST00000561637 TBC1D22BQ9NU19 505 aa28.63■■■□□ 2.17
NME3-202ENST00000561637 FAM50BQ9Y247 325 aa28.63■■■□□ 2.17
NME3-202ENST00000561637 TRPV2Q9Y5S1 764 aa28.63■■■□□ 2.17
NME3-202ENST00000561637 HBP1O60381 514 aa28.62■■■□□ 2.17
NME3-202ENST00000561637 PFKFB2O60825 505 aa28.62■■■□□ 2.17
NME3-202ENST00000561637 CLUL1Q15846 466 aa28.62■■■□□ 2.17
NME3-202ENST00000561637 TSHZ1Q6ZSZ6 1077 aa28.62■■■□□ 2.17
NME3-202ENST00000561637 PPP1R16BQ96T49 567 aa28.62■■■□□ 2.17
NME3-202ENST00000561637 CDHR5Q9HBB8 845 aa28.62■■■□□ 2.17
NME3-202ENST00000561637 GABBR1Q9UBS5 961 aa28.62■■■□□ 2.17
NME3-202ENST00000561637 MAFBQ9Y5Q3 323 aaPredicted RBP28.62■■■□□ 2.17
NME3-202ENST00000561637 EVPLQ92817 2033 aa28.62■■■□□ 2.17
NME3-202ENST00000561637 CHMP2AO43633 222 aa28.61■■■□□ 2.17
NME3-202ENST00000561637 SLC26A2P50443 739 aa28.61■■■□□ 2.17
NME3-202ENST00000561637 UGCGQ16739 394 aa28.61■■■□□ 2.17
NME3-202ENST00000561637 RTN4RL1Q86UN2 441 aaPredicted RBP28.61■■■□□ 2.17
NME3-202ENST00000561637 NECAB1Q8N987 351 aa28.61■■■□□ 2.17
NME3-202ENST00000561637 SLKQ9H2G2 1235 aaPredicted RBP28.61■■■□□ 2.17
NME3-202ENST00000561637 WDR81Q562E7 1941 aa28.61■■■□□ 2.17
NME3-202ENST00000561637 MYH9P35579 1960 aaKnown RBP28.61■■■□□ 2.17
NME3-202ENST00000561637 SMIM35A0A1B0GVV1 85 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 ENPP3O14638 875 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 ZNF862O60290 1169 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 LINC00271P0C7V0 271 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 KRT76Q01546 638 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 TMEM266Q2M3C6 531 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 CTC1Q2NKJ3 1217 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 CKAP2LQ8IYA6 745 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 KIAA0319LQ8IZA0 1049 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 DAGLBQ8NCG7 672 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 SLC5A5Q92911 643 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 PHOX2BQ99453 314 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 UNC45AQ9H3U1 944 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 MUTYHQ9UIF7 546 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 PCDHA10Q9Y5I2 948 aa28.6■■■□□ 2.17
NME3-202ENST00000561637 C22orf31O95567 290 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 PSAPP07602 524 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 USP11P51784 963 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 ANAPC15P60006 121 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 HYAL1Q12794 435 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 SMAD2Q15796 467 aaKnown RBP28.59■■■□□ 2.17
NME3-202ENST00000561637 IER5Q5VY09 327 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 CPLX2Q6PUV4 134 aaKnown RBP28.59■■■□□ 2.17
NME3-202ENST00000561637 OXER1Q8TDS5 423 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 CELF4Q9BZC1 486 aaKnown RBP28.59■■■□□ 2.17
NME3-202ENST00000561637 GINS2Q9Y248 185 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 SAMM50Q9Y512 469 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 IGSF9BQ9UPX0 1349 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 TTC3P53804 2025 aa28.59■■■□□ 2.17
NME3-202ENST00000561637 GRM6O15303 877 aa28.58■■■□□ 2.17
NME3-202ENST00000561637 MBTPS2O43462 519 aa28.58■■■□□ 2.17
NME3-202ENST00000561637 CTNNB1P35222 781 aa28.58■■■□□ 2.17
NME3-202ENST00000561637 GTF2F1P35269 517 aaKnown RBP eCLIP28.58■■■□□ 2.174e-7■■■□□ 18.9
NME3-202ENST00000561637 INF2Q27J81 1249 aa28.58■■■□□ 2.17
NME3-202ENST00000561637 ZNF484Q5JVG2 852 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms