RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	PCDHA5	Q9Y5H7	936 aa		7.29	□□□□□ -1.24
TCF12-223	ENST00000561235	FZD9	O00144	591 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	ELL2	O00472	640 aa	Predicted RBP	7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	GPR3	P46089	330 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	RAB27A	P51159	221 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	EPHB1	P54762	984 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	MYBPC3	Q14896	1274 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	PCBP2	Q15366	365 aa	Known RBP eCLIP	7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	CT83	Q5H943	113 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	TTC38	Q5R3I4	469 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	PGM2L1	Q6PCE3	622 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	NME9	Q86XW9	330 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	PHYKPL	Q8IUZ5	450 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	FMNL3	Q8IVF7	1028 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	C1orf162	Q8NEQ5	155 aa	Predicted RBP	7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	CHMP4C	Q96CF2	233 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	RNF38	Q9H0F5	515 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	CHPF2	Q9P2E5	772 aa		7.28	□□□□□ -1.24
TCF12-223	ENST00000561235	SHTN1	A0MZ66	631 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	LRRC10B	A6NIK2	292 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	PEX10	O60683	326 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	PRL	P01236	227 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	CYP2C8	P10632	490 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	GLRB	P48167	497 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	RGS3	P49796	1198 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	ALDH6A1	Q02252	535 aa	Known RBP	7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	LRRC41	Q15345	812 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	TARBP2	Q15633	366 aa	Known RBP	7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	SKIDA1	Q1XH10	827 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	ZBTB41	Q5SVQ8	909 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	PRAMEF9	Q5VWM5	478 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	UNQ6494/PRO21346	Q6UXR6	183 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	ESPNL	Q6ZVH7	1005 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	IGDCC3	Q8IVU1	814 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	MZB1	Q8WU39	189 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	FAXDC2	Q96IV6	333 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	MAML3	Q96JK9	1138 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	NGRN	Q9NPE2	291 aa	Known RBP	7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	INCENP	Q9NQS7	918 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	USP36	Q9P275	1121 aa	Known RBP	7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	TCEAL9	Q9UHQ7	104 aa		7.27	□□□□□ -1.25
TCF12-223	ENST00000561235	TEX51	A0A1B0GUA7	166 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	AKAP10	O43572	662 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	PRPF6	O94906	941 aa	Known RBP	7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	TAL1	P17542	331 aa	Predicted RBP	7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	MANF	P55145	182 aa	Known RBP	7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	MOGS	Q13724	837 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	MCTP1	Q6DN14	999 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	SLFN12L	Q6IEE8	588 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	TIGD7	Q6NT04	549 aa	Predicted RBP	7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	CCDC62	Q6P9F0	684 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	B3GNT8	Q7Z7M8	397 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	IGDCC4	Q8TDY8	1250 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	TSR2	Q969E8	191 aa	Known RBP	7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	E2F7	Q96AV8	911 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	EAF2	Q96CJ1	260 aa	Predicted RBP	7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	ZSWIM3	Q96MP5	696 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	FOXB1	Q99853	325 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	GORASP1	Q9BQQ3	440 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	CCM2L	Q9NUG4	571 aa	Predicted RBP	7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	FAN1	Q9Y2M0	1017 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	SPEF1	Q9Y4P9	236 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	PPP2R3B	Q9Y5P8	575 aa		7.26	□□□□□ -1.25
TCF12-223	ENST00000561235	PRSS38	A1L453	326 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	PCDHGA12	O60330	932 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	PFKL	P17858	780 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	CCND1	P24385	295 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	IGFBP6	P24592	240 aa	Predicted RBP	7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	LIMS1	P48059	325 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	ROM1	Q03395	351 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	CLUL1	Q15846	466 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	NFE2	Q16621	373 aa	Predicted RBP	7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	RGL3	Q3MIN7	710 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	DTX3	Q8N9I9	347 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	FERMT2	Q96AC1	680 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	NOX5	Q96PH1	765 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	QRSL1	Q9H0R6	528 aa	Known RBP	7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	PRDM12	Q9H4Q4	367 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	GCM1	Q9NP62	436 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	MKS1	Q9NXB0	559 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	GALNT8	Q9NY28	637 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	FAM53C	Q9NYF3	392 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	ZIM2	Q9NZV7	527 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	EDAR	Q9UNE0	448 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	PCDHGA9	Q9Y5G4	932 aa	Known RBP	7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	PCDHGA8	Q9Y5G5	932 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	PCDHGA7	Q9Y5G6	932 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	PCDHGA6	Q9Y5G7	932 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	PCDHGA3	Q9Y5H0	932 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	PCDHGA2	Q9Y5H1	932 aa		7.25	□□□□□ -1.25
TCF12-223	ENST00000561235	LPL	P06858	475 aa		7.24	□□□□□ -1.25
TCF12-223	ENST00000561235	RBP3	P10745	1247 aa		7.24	□□□□□ -1.25
TCF12-223	ENST00000561235	ENPP1	P22413	925 aa		7.24	□□□□□ -1.25
TCF12-223	ENST00000561235	ECE1	P42892	770 aa		7.24	□□□□□ -1.25
TCF12-223	ENST00000561235	ITGA1	P56199	1179 aa		7.24	□□□□□ -1.25
TCF12-223	ENST00000561235	SRSF2	Q01130	221 aa	Known RBP	7.24	□□□□□ -1.25
TCF12-223	ENST00000561235	ADCY2	Q08462	1091 aa		7.24	□□□□□ -1.25
TCF12-223	ENST00000561235	ADAM9	Q13443	819 aa		7.24	□□□□□ -1.25
TCF12-223	ENST00000561235	ODF1	Q14990	250 aa		7.24	□□□□□ -1.25
TCF12-223	ENST00000561235	RTP5	Q14D33	572 aa		7.24	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms