RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 C22orf31O95567 290 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 BMP8BP34820 402 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 NUCB2P80303 420 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 CYP4A11Q02928 519 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 CTTNQ14247 550 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 TRAF7Q6Q0C0 670 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 OTUD6AQ7L8S5 288 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 TPH2Q8IWU9 490 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 EXOC8Q8IYI6 725 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 ZNF710Q8N1W2 664 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 WNT8BQ93098 351 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 GDF15Q99988 308 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 MMTAG2Q9BU76 263 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 FTOQ9C0B1 505 aaKnown RBP eCLIP10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 PRO3102Q9H379 93 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 DBR1Q9UK59 544 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 CFAP45Q9UL16 551 aa10.78□□□□□ -0.68
RABGGTA-221ENST00000561055 VWA3AA6NCI4 1184 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 DDX11L8A8MPP1 907 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 MAFO75444 373 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 IQCF3P0C7M6 154 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 CKBP12277 381 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 SELPP16109 830 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 SYN1P17600 705 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 YWHABP31946 246 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 CYP2C18P33260 490 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 RFC2P35250 354 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 KRT79Q5XKE5 535 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 FAM43BQ6ZT52 329 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 TMEM199Q8N511 208 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 RETREG2Q8NC44 543 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 TRAPPC12Q8WVT3 735 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 NACC1Q96RE7 527 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 CCSER1Q9C0I3 900 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 WNT8AQ9H1J5 351 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 DHX33Q9H6R0 707 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 PRDM5Q9NQX1 630 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 CYP26B1Q9NR63 512 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 TFIP11Q9UBB9 837 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 FBXO2Q9UK22 296 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 RCOR1Q9UKL0 485 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 ZMYND8Q9ULU4 1186 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 CIZ1Q9ULV3 898 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 ATP6V1DQ9Y5K8 247 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 UMODL1Q5DID0 1318 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 KDM3AQ9Y4C1 1321 aa10.77□□□□□ -0.69
RABGGTA-221ENST00000561055 GBF1Q92538 1859 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 ZBTB39O15060 712 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 GAS2O43903 313 aaKnown RBP10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 CXCL10P02778 98 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 PFKMP08237 780 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 RFC5P40937 340 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 RARRES1P49788 294 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 IGBP1P78318 339 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 MGAT3Q09327 533 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 GPNMBQ14956 572 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 ECM1Q16610 540 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 ZNF618Q5T7W0 954 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 RUFY4Q6ZNE9 571 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 RSPH3Q86UC2 560 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 KIAA0319LQ8IZA0 1049 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 DNAJB3Q8WWF6 145 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 BADQ92934 168 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 VWCEQ96DN2 955 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 LBHD1Q9BQE6 289 aaPredicted RBP10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 JPH2Q9BR39 696 aaPredicted RBP10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 PPP1R12CQ9BZL4 782 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 NT5C3AQ9H0P0 336 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 TSHZ2Q9NRE2 1034 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 RBM19Q9Y4C8 960 aaKnown RBP10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 SQORQ9Y6N5 450 aa10.76□□□□□ -0.69
RABGGTA-221ENST00000561055 TTC3P53804 2025 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 TMEM150BA6NC51 233 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 PP2D1A8MPX8 630 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 SPTLC2O15270 562 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 CHRNA1P02708 482 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 TMOD1P28289 359 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 CDC25AP30304 524 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 THPOP40225 353 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 CCT6AP40227 531 aaKnown RBP10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 MAGEA10P43363 369 aaPredicted RBP10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 NPEPPSP55786 919 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 CDC42EP1Q00587 391 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 CEBPZQ03701 1054 aaKnown RBP10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 DNM1Q05193 864 aaKnown RBP10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 GRIN1Q05586 938 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 FPGSQ05932 587 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 TBC1D8BQ0IIM8 1120 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 GRB10Q13322 594 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 PPIGQ13427 754 aaKnown RBP eCLIP10.75□□□□□ -0.694e-13■■■□□ 16.1
RABGGTA-221ENST00000561055 STK38Q15208 465 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 MTERF2Q49AM1 385 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 XKR9Q5GH70 373 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 FOXD4L5Q5VV16 416 aaPredicted RBP10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 IER5Q5VY09 327 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 EFCAB12Q6NXP0 572 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 LRRC8DQ7L1W4 858 aa10.75□□□□□ -0.69
RABGGTA-221ENST00000561055 TRMT1LQ7Z2T5 733 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms