RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ADD3Q9UEY8 706 aaKnown RBP6.21□□□□□ -1.42
ZEB1-220ENST00000560909 CFAP45Q9UL16 551 aa6.21□□□□□ -1.42
ZEB1-220ENST00000560909 ATXN7L1Q9ULK2 861 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-220ENST00000560909 NOL7Q9UMY1 257 aaKnown RBP6.21□□□□□ -1.42
ZEB1-220ENST00000560909 PCDHB6Q9Y5E3 794 aa6.21□□□□□ -1.42
ZEB1-220ENST00000560909 HTTP42858 3142 aa6.21□□□□□ -1.42
ZEB1-220ENST00000560909 MYH6P13533 1939 aa6.21□□□□□ -1.42
ZEB1-220ENST00000560909 FAM237AA0A1B0GTK4 181 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 ASB14A6NK59 587 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 B4DLN1 442 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 SPATA31C2B4DYI2 1134 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 DHX15O43143 795 aaKnown RBP6.2□□□□□ -1.42
ZEB1-220ENST00000560909 LILRA1O75019 489 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 TDP2O95551 362 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 TGFB3P10600 412 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 GPC1P35052 558 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 PSMC4P43686 418 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 PRMT2P55345 433 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 FCGRTP55899 365 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 KRT85P78386 507 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 GRM1Q13255 1194 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 SEMA3FQ13275 785 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 UBAP2LQ14157 1087 aaKnown RBP6.2□□□□□ -1.42
ZEB1-220ENST00000560909 SF3A1Q15459 793 aaKnown RBP6.2□□□□□ -1.42
ZEB1-220ENST00000560909 SKIV2LQ15477 1246 aaKnown RBP6.2□□□□□ -1.42
ZEB1-220ENST00000560909 QPCTQ16769 361 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 TTC38Q5R3I4 469 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 AXDND1Q5T1B0 1012 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-220ENST00000560909 CCDC62Q6P9F0 684 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 NPLOC4Q8TAT6 608 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 CYP2W1Q8TAV3 490 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 KCNG4Q8TDN1 519 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 LEO1Q8WVC0 666 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-220ENST00000560909 HAS1Q92839 578 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 SLC5A5Q92911 643 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 GPRASP2Q96D09 838 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 MAML3Q96JK9 1138 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 PGBD1Q96JS3 809 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 FAM20AQ96MK3 541 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 SENP7Q9BQF6 1050 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 MXRA8Q9BRK3 442 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 TMEM60Q9H2L4 133 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 TFIP11Q9UBB9 837 aaKnown RBP6.2□□□□□ -1.42
ZEB1-220ENST00000560909 NRBP1Q9UHY1 535 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 SRPRBQ9Y5M8 271 aaKnown RBP6.2□□□□□ -1.42
ZEB1-220ENST00000560909 CLIC4Q9Y696 253 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 IVNS1ABPQ9Y6Y0 642 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 SYNGAP1Q96PV0 1343 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 COL11A1P12107 1806 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-220ENST00000560909 ZNF236Q9UL36 1845 aa6.2□□□□□ -1.42
ZEB1-220ENST00000560909 SLC37A4O43826 429 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 FKTNO75072 461 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 PSMD10O75832 226 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 SNAI1O95863 264 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-220ENST00000560909 PGK2P07205 417 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 EIF2AK2P19525 551 aaKnown RBP6.19□□□□□ -1.42
ZEB1-220ENST00000560909 CCND2P30279 289 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 RGS2P41220 211 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 NKX3-2P78367 333 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 SETQ01105 290 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-220ENST00000560909 SPIRE1Q08AE8 756 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 GNL2Q13823 731 aaKnown RBP6.19□□□□□ -1.42
ZEB1-220ENST00000560909 PDIA5Q14554 519 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 ZNF174Q15697 407 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 STXBP2Q15833 593 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 IL17AQ16552 155 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 CSPP1Q1MSJ5 1256 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 LETM2Q2VYF4 491 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 ARHGEF16Q5VV41 709 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 IGSF22Q8N9C0 903 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 ZNF296Q8WUU4 475 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-220ENST00000560909 FOXD4L4Q8WXT5 416 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-220ENST00000560909 FERMT2Q96AC1 680 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 ABHD17AQ96GS6 310 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 ERO1AQ96HE7 468 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 CHAMP1Q96JM3 812 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 CDHR1Q96JP9 859 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 RIT2Q99578 217 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 APBA2Q99767 749 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 TINF2Q9BSI4 451 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 FTOQ9C0B1 505 aaKnown RBP eCLIP6.19□□□□□ -1.42
ZEB1-220ENST00000560909 ARHGAP39Q9C0H5 1083 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 GPAMQ9HCL2 828 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 VTA1Q9NP79 307 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 KCNH7Q9NS40 1196 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 SLC5A4Q9NY91 659 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 SRRDQ9UH36 339 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 DDX25Q9UHL0 483 aaKnown RBP6.19□□□□□ -1.42
ZEB1-220ENST00000560909 FBXO2Q9UK22 296 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-220ENST00000560909 CDV3Q9UKY7 258 aaKnown RBP6.19□□□□□ -1.42
ZEB1-220ENST00000560909 CEP131Q9UPN4 1083 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 NFASCO94856 1347 aa6.19□□□□□ -1.42
ZEB1-220ENST00000560909 DOCK3Q8IZD9 2030 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 A0A1W2PQ27 194 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 A0A1W2PQ64 194 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 A0A1W2PQD8 194 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 TNPO2O14787 897 aaKnown RBP6.18□□□□□ -1.42
ZEB1-220ENST00000560909 SPTLC2O15270 562 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 MSH4O15457 936 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 SLC26A4O43511 780 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms