RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 ARHGEF6Q15052 776 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 USPL1Q5W0Q7 1092 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 NDUFAF2Q8N183 169 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 ADAM22Q9P0K1 906 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 MAST1Q9Y2H9 1570 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 PVALEFA0A1B0GWK0 134 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 RASA4BC9J798 803 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 RASA4O43374 803 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 ZSCAN20P17040 1043 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 PDCLQ13371 301 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 ACAD11Q709F0 780 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 CNPY4Q8N129 248 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 LCORLQ8N3X6 602 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 HEXIM2Q96MH2 286 aaKnown RBP14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 USP21Q9UK80 565 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 SNX24Q9Y343 169 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 PSMA2P25787 234 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 SOX5P35711 763 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 EAPPQ56P03 285 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 FOXP4Q8IVH2 680 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 FAF2Q96CS3 445 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 BPIFA3Q9BQP9 254 aa14.15□□□□□ -0.14
CSPG4P11-201ENST00000560634 A0A0G2JND7 137 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 CD58P19256 250 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 OSBPP22059 807 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 GPC5P78333 572 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 TMED1Q13445 227 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 TTC17Q96AE7 1141 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 SAAL1Q96ER3 474 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 MTA3Q9BTC8 594 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 BHMT2Q9H2M3 363 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 SLC8A2Q9UPR5 921 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 BCS1LQ9Y276 419 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 SLC16A2P36021 539 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 E2F4Q16254 413 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 MTERF2Q49AM1 385 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 ZNF667Q5HYK9 610 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 CC2D1AQ6P1N0 951 aaPredicted RBP14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 PDXDC2PQ6P474 469 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 PUS7LQ9H0K6 701 aaKnown RBP14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 SCHIP1Q9P0W5 487 aaPredicted RBP14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 DNAJC12Q9UKB3 198 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 TRIM33Q9UPN9 1127 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 A0A087WWV3 80 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 DDIT3P35638 169 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 ORC2Q13416 577 aaPredicted RBP14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 PTPN21Q16825 1174 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 ICE2Q659A1 982 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 TBC1D9BQ66K14 1250 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 CNOT8Q9UFF9 292 aaKnown RBP14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 ADGRL2O95490 1459 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 ZBBXA8MT70 800 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 USP17L2Q6R6M4 530 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 MSTO1Q9BUK6 570 aa14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 NGRNQ9NPE2 291 aaKnown RBP14.14□□□□□ -0.15
CSPG4P11-201ENST00000560634 GMNCA6NCL1 334 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 ERVV-1B6SEH8 477 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 PALMO75781 387 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 YWHAHQ04917 246 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 ABHD10Q9NUJ1 306 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 STRIP2Q9ULQ0 834 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 PPEF1O14829 653 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 CHGBP05060 677 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 CRKLP46109 303 aaKnown RBP14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 RCAN1P53805 252 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 MCPH1Q8NEM0 835 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 CYTH2Q99418 400 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 OSBPL5Q9H0X9 879 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 CYP26B1Q9NR63 512 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 ABCA5Q8WWZ7 1642 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 GRID2IPA4D2P6 1211 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 PRKAB2O43741 272 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 CALB1P05937 261 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 CIITAP33076 1130 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 KIAA1841Q6NSI8 718 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 ZC3H18Q86VM9 953 aaKnown RBP14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 STK36Q9NRP7 1315 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 ANAPC7Q9UJX3 599 aa14.13□□□□□ -0.15
CSPG4P11-201ENST00000560634 PLEKHG1Q9ULL1 1385 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 HAUS5O94927 633 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 MCF2P10911 925 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 ANXA13P27216 316 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 NOP14P78316 857 aaKnown RBP14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 PTPN12Q05209 780 aaKnown RBP14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 MORF4L2Q15014 288 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 PROSER3Q2NL68 480 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 EPM2AIP1Q7L775 607 aaPredicted RBP14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 BTBD6Q96KE9 485 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 BRIP1Q9BX63 1249 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 INTUQ9ULD6 942 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 SNX5Q9Y5X3 404 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 IGSF1Q8N6C5 1336 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 RNF207Q6ZRF8 634 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 ASNSD1Q9NWL6 643 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 L3MBTL1Q9Y468 752 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 TMEM2Q9UHN6 1383 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 FAM187AA6NFU0 413 aa14.12□□□□□ -0.15
CSPG4P11-201ENST00000560634 JAK3P52333 1124 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms