RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 OPLAHO14841 1288 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 PPM1AP35813 382 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 NT5C2P49902 561 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 ANAPC15P60006 121 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 KCNC3Q14003 757 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 MCMDC2Q4G0Z9 681 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 ATAT1Q5SQI0 421 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 ODR4Q5SWX8 454 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 CWF19L1Q69YN2 538 aaKnown RBP10.65□□□□□ -0.7
SMAD3-215ENST00000560424 ZDHHC14Q8IZN3 488 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 CRIPAKQ8N1N5 446 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 RUBCNQ92622 972 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 INPP4AQ96PE3 977 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-215ENST00000560424 SMARCAD1Q9H4L7 1026 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 C1orf112Q9NSG2 853 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 DIAPH3Q9NSV4 1193 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 CDH22Q9UJ99 828 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 GINS2Q9Y248 185 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 DOCK5Q9H7D0 1870 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 VPS13AQ96RL7 3174 aa10.65□□□□□ -0.71
SMAD3-215ENST00000560424 NEDD4P46934 1319 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 IGSF9BQ9UPX0 1349 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 MBLAC1A4D2B0 266 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-215ENST00000560424 HIDE1A8MVS5 230 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 PI15O43692 258 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 SDHBP21912 280 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 PLCB3Q01970 1234 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 SMC1AQ14683 1233 aaKnown RBP10.64□□□□□ -0.71
SMAD3-215ENST00000560424 RARS2Q5T160 578 aaKnown RBP10.64□□□□□ -0.71
SMAD3-215ENST00000560424 TBC1D10CQ8IV04 446 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 ABI1Q8IZP0 508 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 SIX5Q8N196 739 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 SEPT1Q8WYJ6 367 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 ZSCAN10Q96SZ4 725 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-215ENST00000560424 SENP7Q9BQF6 1050 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 UBAC1Q9BSL1 405 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 CELF4Q9BZC1 486 aaKnown RBP10.64□□□□□ -0.71
SMAD3-215ENST00000560424 AZI2Q9H6S1 392 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 ATP6V0A4Q9HBG4 840 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 CYP26B1Q9NR63 512 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 USTQ9Y2C2 406 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 HCFC2Q9Y5Z7 792 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 R4GN57 208 aa10.64□□□□□ -0.71
SMAD3-215ENST00000560424 KLRF2D3W0D1 207 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 RPS6KA5O75582 802 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 EOMESO95936 686 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 WEE2P0C1S8 567 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 MRPS9P82933 396 aaKnown RBP10.63□□□□□ -0.71
SMAD3-215ENST00000560424 KRT76Q01546 638 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 TDGQ13569 410 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 RSPO4Q2I0M5 234 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-215ENST00000560424 TMEM266Q2M3C6 531 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 IFIT1BQ5T764 474 aaKnown RBP10.63□□□□□ -0.71
SMAD3-215ENST00000560424 FAM102BQ5T8I3 360 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 KIAA1841Q6NSI8 718 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 XRRA1Q6P2D8 792 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 FAM43BQ6ZT52 329 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-215ENST00000560424 SLC24A5Q71RS6 500 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 SMARCC2Q8TAQ2 1214 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 RIN2Q8WYP3 895 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-215ENST00000560424 CUL5Q93034 780 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 CDHR1Q96JP9 859 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 ZNF558Q96NG5 402 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 IPO9Q96P70 1041 aaKnown RBP10.63□□□□□ -0.71
SMAD3-215ENST00000560424 ADAM2Q99965 735 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 DZANK1Q9NVP4 752 aa10.63□□□□□ -0.71
SMAD3-215ENST00000560424 EP300Q09472 2414 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-215ENST00000560424 B4E1Z4 1266 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 HOXA2O43364 376 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 PPP1R11O60927 126 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-215ENST00000560424 INSRRP14616 1297 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 SEMA3FQ13275 785 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 ST3GAL2Q16842 350 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 MARCH8Q5T0T0 291 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 KCNT2Q6UVM3 1135 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 CWC27Q6UX04 472 aaKnown RBP10.62□□□□□ -0.71
SMAD3-215ENST00000560424 CCDC149Q6ZUS6 474 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 OTOP3Q7RTS5 596 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 LRRC43Q8N309 656 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 STAG2Q8N3U4 1231 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 NME8Q8N427 588 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 ENAHQ8N8S7 591 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-215ENST00000560424 KCNB2Q92953 911 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 FAM227BQ96M60 508 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 KIF2CQ99661 725 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 LSG1Q9H089 658 aaKnown RBP10.62□□□□□ -0.71
SMAD3-215ENST00000560424 IL25Q9H293 177 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 ERVK-5Q9HDB9 667 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 DLL3Q9NYJ7 618 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 HCSTQ9UBK5 93 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 DUSP12Q9UNI6 340 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 PCDHA2Q9Y5H9 948 aa10.62□□□□□ -0.71
SMAD3-215ENST00000560424 FNDC1Q4ZHG4 1894 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-215ENST00000560424 LOXHD1Q8IVV2 1947 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 A0A0D9SFI3 127 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 GPR182O15218 404 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 FGFR1P11362 822 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 NPR3P17342 541 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 HSPA4P34932 840 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 NMIQ13287 307 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms