RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ENC1O14682 589 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 KIF3CO14782 793 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 PPFIA4O75335 1185 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 JADE1Q6IE81 842 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 FAM84BQ96KN1 310 aaPredicted RBP14.49□□□□□ -0.09
TRAF3-208ENST00000560371 NCAPGQ9BPX3 1015 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 SPZ1Q9BXG8 430 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 GABBR1Q9UBS5 961 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 XXYLT1Q8NBI6 393 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 LRRC8CQ8TDW0 803 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 PPARGP37231 505 aaPredicted RBP14.49□□□□□ -0.09
TRAF3-208ENST00000560371 GTF2A1P52655 376 aaPredicted RBP14.49□□□□□ -0.09
TRAF3-208ENST00000560371 HINFPQ9BQA5 517 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 NEDD4P46934 1319 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 CASQ2O14958 399 aaPredicted RBP14.49□□□□□ -0.09
TRAF3-208ENST00000560371 POTEDQ86YR6 584 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 CCHCR1Q8TD31 782 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 SAMSN1Q9NSI8 373 aaKnown RBP14.49□□□□□ -0.09
TRAF3-208ENST00000560371 OAS2P29728 719 aaKnown RBP14.48□□□□□ -0.09
TRAF3-208ENST00000560371 CXCR5P32302 372 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 TTC30AQ86WT1 665 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 RBM46Q8TBY0 533 aaKnown RBP14.48□□□□□ -0.09
TRAF3-208ENST00000560371 ENOX1Q8TC92 643 aaKnown RBP14.48□□□□□ -0.09
TRAF3-208ENST00000560371 HPCAL4Q9UM19 191 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 PGRMC1O00264 195 aaKnown RBP14.48□□□□□ -0.09
TRAF3-208ENST00000560371 HMGCS2P54868 508 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 UNC13DQ70J99 1090 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 SLC35F6Q8N357 371 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 TLK1Q9UKI8 766 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 PSMA2P25787 234 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 TRIM28Q13263 835 aaKnown RBP14.48□□□□□ -0.09
TRAF3-208ENST00000560371 TSNAXIP1Q2TAA8 658 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 CYP4F22Q6NT55 531 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 PPP4R4Q6NUP7 873 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 PPP1R18Q6NYC8 613 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 CEP120Q8N960 986 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 CRAMP1Q96RY5 1269 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 E9PCH4 1651 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 ATP1A2P50993 1020 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 ZBED6P86452 979 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 SKIV2LQ15477 1246 aaKnown RBP14.48□□□□□ -0.09
TRAF3-208ENST00000560371 GOLGA8QA0A0J9YX86 632 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 GOLGA8OA6NCC3 632 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 GOLGA8NF8WBI6 632 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 TBC1D10CQ8IV04 446 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 ZNF521Q96K83 1311 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 IRX4P78413 519 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 DBN1Q16643 649 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 MICALL2Q8IY33 904 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 NEK9Q8TD19 979 aa14.48□□□□□ -0.09
TRAF3-208ENST00000560371 ASPHQ12797 758 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 KCNV1Q6PIU1 500 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 CYB5R4Q7L1T6 521 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 MXD3Q9BW11 206 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 MRPL4Q9BYD3 311 aaKnown RBP14.47□□□□□ -0.09
TRAF3-208ENST00000560371 PRDM5Q9NQX1 630 aaPredicted RBP14.47□□□□□ -0.09
TRAF3-208ENST00000560371 A0A087WWV3 80 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 ZBED1O96006 694 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 PCGF5Q86SE9 256 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 LMNTD2Q8IXW0 634 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 HSPH1Q92598 858 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 COG2Q14746 738 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 QRICH1Q2TAL8 776 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 SLC10A5Q5PT55 438 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 NUDCD1Q96RS6 583 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 GCOM2Q9BZD3 368 aaPredicted RBP14.47□□□□□ -0.09
TRAF3-208ENST00000560371 GBP7Q8N8V2 638 aaPredicted RBP14.47□□□□□ -0.09
TRAF3-208ENST00000560371 BARHL2Q9NY43 387 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 STK38LQ9Y2H1 464 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 LY9Q9HBG7 655 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 STK36Q9NRP7 1315 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 ASB14A6NK59 587 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 DPYSL4O14531 572 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 ECEL1O95672 775 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 MTMR2Q13614 643 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 FAM213AQ9BRX8 229 aa14.47□□□□□ -0.09
TRAF3-208ENST00000560371 NHEJ1Q9H9Q4 299 aaPredicted RBP14.47□□□□□ -0.09
TRAF3-208ENST00000560371 PPP1R12AO14974 1030 aaPredicted RBP14.46□□□□□ -0.09
TRAF3-208ENST00000560371 P4HBP07237 508 aaKnown RBP14.46□□□□□ -0.09
TRAF3-208ENST00000560371 RFC1P35251 1148 aaPredicted RBP14.46□□□□□ -0.09
TRAF3-208ENST00000560371 EIF4A3P38919 411 aaKnown RBP14.46□□□□□ -0.09
TRAF3-208ENST00000560371 NNMTP40261 264 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 TCP11X2Q5H9J9 407 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 PPP6R3Q5H9R7 873 aaPredicted RBP14.46□□□□□ -0.09
TRAF3-208ENST00000560371 RNF10Q8N5U6 811 aaKnown RBP14.46□□□□□ -0.09
TRAF3-208ENST00000560371 PBKQ96KB5 322 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 HSPA6P17066 643 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 TAF1CQ15572 869 aaPredicted RBP14.46□□□□□ -0.09
TRAF3-208ENST00000560371 GJB4Q9NTQ9 266 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 SCINQ9Y6U3 715 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 MSH2P43246 934 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 ZNF157P51786 506 aaPredicted RBP14.46□□□□□ -0.09
TRAF3-208ENST00000560371 RESTQ13127 1097 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 FAM114A2Q9NRY5 505 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 GPC3P51654 580 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 LRRC31Q6UY01 552 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 PROM2Q8N271 834 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 AFG1LQ8WV93 481 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 SEL1LQ9UBV2 794 aa14.46□□□□□ -0.09
TRAF3-208ENST00000560371 GOLGA8KD6RF30 607 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms