RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PARNO95453 639 aaKnown RBP18.86■□□□□ 0.61
RPL28-209ENST00000560055 RPLP2P05387 115 aaKnown RBP18.86■□□□□ 0.61
RPL28-209ENST00000560055 PKP1Q13835 747 aa18.86■□□□□ 0.61
RPL28-209ENST00000560055 FAM26DQ5JW98 314 aa18.86■□□□□ 0.61
RPL28-209ENST00000560055 LINC01465Q8N7H1 131 aa18.86■□□□□ 0.61
RPL28-209ENST00000560055 DNAJB3Q8WWF6 145 aa18.86■□□□□ 0.61
RPL28-209ENST00000560055 POLR3CQ9BUI4 534 aaPredicted RBP18.86■□□□□ 0.61
RPL28-209ENST00000560055 SEPT9Q9UHD8 586 aaPredicted RBP18.86■□□□□ 0.61
RPL28-209ENST00000560055 MAGEB2O15479 319 aa18.85■□□□□ 0.61
RPL28-209ENST00000560055 BMP15O95972 392 aa18.85■□□□□ 0.61
RPL28-209ENST00000560055 CXCL10P02778 98 aa18.85■□□□□ 0.61
RPL28-209ENST00000560055 ZSCAN22P10073 491 aaPredicted RBP18.85■□□□□ 0.61
RPL28-209ENST00000560055 YWHABP31946 246 aaKnown RBP18.85■□□□□ 0.61
RPL28-209ENST00000560055 MGAT3Q09327 533 aa18.85■□□□□ 0.61
RPL28-209ENST00000560055 SF3A1Q15459 793 aaKnown RBP18.85■□□□□ 0.61
RPL28-209ENST00000560055 DTHD1Q6ZMT9 781 aa18.85■□□□□ 0.61
RPL28-209ENST00000560055 CATSPER3Q86XQ3 398 aa18.85■□□□□ 0.61
RPL28-209ENST00000560055 TPH2Q8IWU9 490 aa18.85■□□□□ 0.61
RPL28-209ENST00000560055 FTOQ9C0B1 505 aaKnown RBP eCLIP18.85■□□□□ 0.61
RPL28-209ENST00000560055 TUFT1Q9NNX1 390 aa18.85■□□□□ 0.61
RPL28-209ENST00000560055 TET1Q8NFU7 2136 aa18.85■□□□□ 0.61
RPL28-209ENST00000560055 DDX11L8A8MPP1 907 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 RSPH10B2B2RC85 870 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 NBNO60934 754 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 MED24O75448 989 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 CHRNA1P02708 482 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 PFKMP08237 780 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 RSPH10BP0C881 870 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 ACRP10323 421 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 RPA1P27694 616 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 PTPAQ15257 358 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 LRIT3Q3SXY7 679 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 MTERF2Q49AM1 385 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 TMEM240Q5SV17 173 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 C9orf50Q5SZB4 431 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 PLA2G4FQ68DD2 849 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 KIAA0319LQ8IZA0 1049 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.84■□□□□ 0.612e-8■■■□□ 17.5
RPL28-209ENST00000560055 RAB34Q9BZG1 259 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 FAM49AQ9H0Q0 323 aaPredicted RBP18.84■□□□□ 0.61
RPL28-209ENST00000560055 LRWD1Q9UFC0 647 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 PPME1Q9Y570 386 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 CLIC4Q9Y696 253 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 SCN5AQ14524 2016 aa18.84■□□□□ 0.61
RPL28-209ENST00000560055 IGKV6-21A0A0C4DH24 114 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 ZBTB39O15060 712 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 F13A1P00488 732 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 CTSHP09668 335 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 SHHQ15465 462 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 HAUS3Q68CZ6 603 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 PSRC1Q6PGN9 363 aaPredicted RBP18.83■□□□□ 0.6
RPL28-209ENST00000560055 RSPH3Q86UC2 560 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 RPUSD2Q8IZ73 545 aaKnown RBP18.83■□□□□ 0.6
RPL28-209ENST00000560055 NME8Q8N427 588 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 ZNF579Q8NAF0 562 aaKnown RBP18.83■□□□□ 0.6
RPL28-209ENST00000560055 ERMNQ8TAM6 284 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 SH2D3AQ9BRG2 576 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 CYP26B1Q9NR63 512 aa18.83■□□□□ 0.6
RPL28-209ENST00000560055 MORC2Q9Y6X9 1032 aaPredicted RBP18.83■□□□□ 0.6
RPL28-209ENST00000560055 COL6A3P12111 3177 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 MAFO75444 373 aaPredicted RBP18.82■□□□□ 0.6
RPL28-209ENST00000560055 MUTP22033 750 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 NPEPPSP55786 919 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 MRPS6P82932 125 aaKnown RBP18.82■□□□□ 0.6
RPL28-209ENST00000560055 TBC1D8BQ0IIM8 1120 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 RASIP1Q5U651 963 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 ZNF365Q70YC5 407 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 Q7L0L9 218 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 DEFB128Q7Z7B8 93 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 USP28Q96RU2 1077 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 OSBPL7Q9BZF2 842 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 ANKEF1Q9NU02 776 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 STK24Q9Y6E0 443 aa18.82■□□□□ 0.6
RPL28-209ENST00000560055 EVPLQ92817 2033 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 KDM3AQ9Y4C1 1321 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 VWA3AA6NCI4 1184 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 PP2D1A8MPX8 630 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 BRD1O95696 1058 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 XRCC6P12956 609 aaKnown RBP eCLIP18.81■□□□□ 0.6
RPL28-209ENST00000560055 CLCN3P51790 818 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 MKRN4PQ13434 485 aaPredicted RBP18.81■□□□□ 0.6
RPL28-209ENST00000560055 ECM1Q16610 540 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 EFCAB12Q6NXP0 572 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 POTEGQ6S5H5 508 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 OTUD6AQ7L8S5 288 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 LRRC71Q8N4P6 559 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 METTL13Q8N6R0 699 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 HERVK_113Q902F9 699 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 CEP170P1Q96L14 293 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 MMTAG2Q9BU76 263 aaKnown RBP18.81■□□□□ 0.6
RPL28-209ENST00000560055 DHX33Q9H6R0 707 aaKnown RBP18.81■□□□□ 0.6
RPL28-209ENST00000560055 ZDHHC9Q9Y397 364 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 CDY2AQ9Y6F7 541 aa18.81■□□□□ 0.6
RPL28-209ENST00000560055 RBAK-RBAKDNI3L0D1 243 aa18.8■□□□□ 0.6
RPL28-209ENST00000560055 NASPP49321 788 aaPredicted RBP18.8■□□□□ 0.6
RPL28-209ENST00000560055 RARRES1P49788 294 aa18.8■□□□□ 0.6
RPL28-209ENST00000560055 TMEM62Q0P6H9 643 aa18.8■□□□□ 0.6
RPL28-209ENST00000560055 DRP2Q13474 957 aa18.8■□□□□ 0.6
RPL28-209ENST00000560055 PLEKHG4Q58EX7 1191 aa18.8■□□□□ 0.6
RPL28-209ENST00000560055 FOXD4L5Q5VV16 416 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms