RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 FAM177A1Q8N128 213 aaPredicted RBP13.89□□□□□ -0.19
SPG11-219ENST00000559822 ZNF710Q8N1W2 664 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 ZNF689Q96CS4 500 aaPredicted RBP13.89□□□□□ -0.19
SPG11-219ENST00000559822 TM6SF1Q9BZW5 370 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 VPS54Q9P1Q0 977 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 LRFN2Q9ULH4 789 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 FAM50BQ9Y247 325 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 SAMM50Q9Y512 469 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 MAFBQ9Y5Q3 323 aaPredicted RBP13.89□□□□□ -0.19
SPG11-219ENST00000559822 BRWD1Q9NSI6 2320 aa13.89□□□□□ -0.19
SPG11-219ENST00000559822 RBAK-RBAKDNI3L0D1 243 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 GPR182O15218 404 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 MAGEB2O15479 319 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 RPS6KA5O75582 802 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 DEXIO95424 95 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 NFX1Q12986 1120 aaKnown RBP13.88□□□□□ -0.19
SPG11-219ENST00000559822 NAALADL2Q58DX5 795 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 RASGRP4Q8TDF6 673 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 LINC01599Q8WXQ3 324 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 P2RX5Q93086 422 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 PPP2R3CQ969Q6 453 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 PABPC5Q96DU9 382 aaKnown RBP13.88□□□□□ -0.19
SPG11-219ENST00000559822 ZNF274Q96GC6 653 aaPredicted RBP13.88□□□□□ -0.19
SPG11-219ENST00000559822 RIT2Q99578 217 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
SPG11-219ENST00000559822 C1orf112Q9NSG2 853 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 MYH9P35579 1960 aaKnown RBP13.88□□□□□ -0.19
SPG11-219ENST00000559822 MUC3AQ02505 3323 aa13.88□□□□□ -0.19
SPG11-219ENST00000559822 REV3LO60673 3130 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 DENND3A2RUS2 1198 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 GAS7O60861 476 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 C22orf31O95567 290 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 TMOD1P28289 359 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 SFNP31947 248 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 SARSP49591 514 aaKnown RBP13.87□□□□□ -0.19
SPG11-219ENST00000559822 CRYBB1P53674 252 aaPredicted RBP13.87□□□□□ -0.19
SPG11-219ENST00000559822 TOB2Q14106 344 aaPredicted RBP13.87□□□□□ -0.19
SPG11-219ENST00000559822 TCEAL5Q5H9L2 206 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 GALNT17Q6IS24 598 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 KIAA0319LQ8IZA0 1049 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 METTL13Q8N6R0 699 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 MAP7D2Q96T17 732 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 NRBP2Q9NSY0 501 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 GABBR1Q9UBS5 961 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 XIRP2A4UGR9 3374 aa13.87□□□□□ -0.19
SPG11-219ENST00000559822 LOXHD1Q8IVV2 1947 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 ZBTB42B2RXF5 422 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 ADAMTS3O15072 1205 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 PPFIA3O75145 1194 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 CDKL5O76039 1030 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 MMP1P03956 469 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 LINC00271P0C7V0 271 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 ATP4AP20648 1035 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 JAK3P52333 1124 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 LRCH2Q5VUJ6 765 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 PTCRAQ6ISU1 281 aaPredicted RBP13.86□□□□□ -0.19
SPG11-219ENST00000559822 RTN4RL1Q86UN2 441 aaPredicted RBP13.86□□□□□ -0.19
SPG11-219ENST00000559822 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 RDM1Q8NG50 284 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 NEK9Q8TD19 979 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 LENG9Q96B70 501 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 UIMC1Q96RL1 719 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 TEKT3Q9BXF9 490 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 ERVK-5Q9HDB9 667 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 DISC1Q9NRI5 854 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 PCDHA4Q9UN74 947 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 PCDHB7Q9Y5E2 793 aa13.86□□□□□ -0.19
SPG11-219ENST00000559822 MRPL42Q9Y6G3 142 aaKnown RBP13.86□□□□□ -0.19
SPG11-219ENST00000559822 GRM6O15303 877 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 MSH4O15457 936 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 OATP04181 439 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 COL19A1Q14993 1142 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 KIZQ2M2Z5 673 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 TMEM266Q2M3C6 531 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 EP400NLQ6ZTU2 488 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 SLC24A5Q71RS6 500 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 TRMT1LQ7Z2T5 733 aaKnown RBP13.85□□□□□ -0.19
SPG11-219ENST00000559822 BLIDQ8IZY5 108 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 TBCKQ8TEA7 893 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 SLC5A5Q92911 643 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 ADAM2Q99965 735 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 TMX1Q9H3N1 280 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 AAASQ9NRG9 546 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 PDRG1Q9NUG6 133 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 CLDND1Q9NY35 253 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 ST3GAL5Q9UNP4 418 aa13.85□□□□□ -0.19
SPG11-219ENST00000559822 NOC2LQ9Y3T9 749 aaKnown RBP13.85□□□□□ -0.19
SPG11-219ENST00000559822 GRXCR2A6NFK2 248 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 XBP1P17861 261 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 COL9A1P20849 921 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 PRKCEQ02156 737 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 Q4G0T1 1027 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 PAN2Q504Q3 1202 aaKnown RBP13.84□□□□□ -0.19
SPG11-219ENST00000559822 MOXD1Q6UVY6 613 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 DAGLBQ8NCG7 672 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.84□□□□□ -0.19
SPG11-219ENST00000559822 OSMRQ99650 979 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 UPF3BQ9BZI7 483 aaKnown RBP13.84□□□□□ -0.19
SPG11-219ENST00000559822 RGS18Q9NS28 235 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms