RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 C10orf76Q5T2E6 689 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 HGSNATQ68CP4 663 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 GBP6Q6ZN66 633 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 FMNL3Q8IVF7 1028 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 MSANTD4Q8NCY6 345 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 HNRNPLLQ8WVV9 542 aaKnown RBP12.38□□□□□ -0.43
CLPX-204ENST00000559152 GBP3Q9H0R5 595 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 RPAP3Q9H6T3 665 aaPredicted RBP12.38□□□□□ -0.43
CLPX-204ENST00000559152 PICK1Q9NRD5 415 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 ZNF446Q9NWS9 450 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 BCS1LQ9Y276 419 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 MACROD2A1Z1Q3 448 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 RCCD1A6NED2 376 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 AKAP3O75969 853 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 LYPLA2O95372 231 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 OAZ1P54368 228 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 BACE1P56817 501 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 MTMR2Q13614 643 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 ASIC2Q16515 512 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 ODR4Q5SWX8 454 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 RNF207Q6ZRF8 634 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 GANQ9H2C0 597 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 COL20A1Q9P218 1284 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 LARSQ9P2J5 1176 aaKnown RBP12.38□□□□□ -0.43
CLPX-204ENST00000559152 ZNF112Q9UJU3 913 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 DAAM1Q9Y4D1 1078 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 GJA3Q9Y6H8 435 aa12.38□□□□□ -0.43
CLPX-204ENST00000559152 SFI1A8K8P3 1242 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 C19orf81C9J6K1 198 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 TGFB1I1O43294 461 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 ATP1A1P05023 1023 aaKnown RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 SFNP31947 248 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 QARSP47897 775 aaKnown RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 TBC1D10BQ4KMP7 808 aaPredicted RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 DCAF17Q5H9S7 520 aaPredicted RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 CC2D1AQ6P1N0 951 aaPredicted RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 SMAP1Q8IYB5 467 aaPredicted RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 ZNF280CQ8ND82 737 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 SLC17A8Q8NDX2 589 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 TRERF1Q96PN7 1200 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 SPAG5Q96R06 1193 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 CRACR2AQ9BSW2 395 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 TMEM206Q9H813 350 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 TSKSQ9UJT2 592 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 RAB21Q9UL25 225 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 FRMD4BQ9Y2L6 1034 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 ATAD5Q96QE3 1844 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 ENC1O14682 589 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 MAFGO15525 162 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 DHX15O43143 795 aaKnown RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 EGFRP00533 1210 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 ZSCAN20P17040 1043 aaPredicted RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 NMT1P30419 496 aaKnown RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 JAK3P52333 1124 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 RPS6P62753 249 aaKnown RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 KLHL30Q0D2K2 578 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 SPP2Q13103 211 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 RAPGEF1Q13905 1077 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 SLC18A3Q16572 532 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 TCERG1LQ5VWI1 586 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 FAM186BQ8IYM0 893 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 BANK1Q8NDB2 785 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 RDM1Q8NG50 284 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 CCDC43Q96MW1 224 aaKnown RBP12.37□□□□□ -0.43
CLPX-204ENST00000559152 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 SAMM50Q9Y512 469 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 PPP2R3BQ9Y5P8 575 aa12.37□□□□□ -0.43
CLPX-204ENST00000559152 VWA5AO00534 786 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 UCHL3P15374 230 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 PON1P27169 355 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 SNRPFP62306 86 aaKnown RBP12.36□□□□□ -0.43
CLPX-204ENST00000559152 KRT76Q01546 638 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 GFPT1Q06210 699 aaPredicted RBP12.36□□□□□ -0.43
CLPX-204ENST00000559152 PGM5Q15124 567 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 PPP2R5AQ15172 486 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 MUM1L1Q5H9M0 696 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 NBPF12Q5TAG4 269 aaPredicted RBP12.36□□□□□ -0.43
CLPX-204ENST00000559152 KLHDC7AQ5VTJ3 777 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 SLC9A9Q8IVB4 645 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 TMEM174Q8WUU8 243 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 SLC35C1Q96A29 364 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 C12orf42Q96LP6 360 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 RMDN3Q96TC7 470 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 WRAP73Q9P2S5 460 aaPredicted RBP12.36□□□□□ -0.43
CLPX-204ENST00000559152 TFR2Q9UP52 801 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 FHOD1Q9Y613 1164 aa12.36□□□□□ -0.43
CLPX-204ENST00000559152 DDX39AO00148 427 aaKnown RBP12.35□□□□□ -0.43
CLPX-204ENST00000559152 CLIC2O15247 247 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 TLR2O60603 784 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 HIP1RO75146 1068 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 PNMA6AP0CW24 399 aaPredicted RBP12.35□□□□□ -0.43
CLPX-204ENST00000559152 TCP1P17987 556 aaKnown RBP12.35□□□□□ -0.43
CLPX-204ENST00000559152 MRPS9P82933 396 aaKnown RBP12.35□□□□□ -0.43
CLPX-204ENST00000559152 ARHGEF16Q5VV41 709 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 CCDC70Q6NSX1 233 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 VPS36Q86VN1 386 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 SYCP3Q8IZU3 236 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 BORCS6Q96GS4 357 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms