RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 MFSD10Q14728 455 aa17.48■□□□□ 0.39
LINC01220-201ENST00000558575 KIAA0753Q2KHM9 967 aa17.48■□□□□ 0.39
LINC01220-201ENST00000558575 FAM173BQ6P4H8 233 aa17.48■□□□□ 0.39
LINC01220-201ENST00000558575 CCDC60Q8IWA6 550 aaPredicted RBP17.48■□□□□ 0.39
LINC01220-201ENST00000558575 PHOSPHO2Q8TCD6 241 aa17.48■□□□□ 0.39
LINC01220-201ENST00000558575 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.48■□□□□ 0.39
LINC01220-201ENST00000558575 NOL7Q9UMY1 257 aaKnown RBP17.48■□□□□ 0.39
LINC01220-201ENST00000558575 ZFHX2Q9C0A1 2572 aaPredicted RBP17.48■□□□□ 0.39
LINC01220-201ENST00000558575 MYO7AQ13402 2215 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 POTEB3A0JP26 581 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 NEMFO60524 1076 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 ATP4AP20648 1035 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 KCNA5P22460 613 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 CHMP4BP1P59074 171 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 PPP2R5CQ13362 524 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 BECN1Q14457 450 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 CALCRLQ16602 461 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 SWSAP1Q6NVH7 229 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 NFRKBQ6P4R8 1299 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 POTEBQ6S5H4 581 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 CTAGE1Q96RT6 745 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 SMARCAD1Q9H4L7 1026 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 DISC1Q9NRI5 854 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 HDAC6Q9UBN7 1215 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 PCDHA10Q9Y5I2 948 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
LINC01220-201ENST00000558575 DCXO43602 365 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 CHMP2AO43633 222 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 ACTN1P12814 892 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 TXKP42681 527 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 STAT5BP51692 787 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 ORC2Q13416 577 aaPredicted RBP17.46■□□□□ 0.39
LINC01220-201ENST00000558575 RILPL1Q5EBL4 403 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 PTCRAQ6ISU1 281 aaPredicted RBP17.46■□□□□ 0.39
LINC01220-201ENST00000558575 MIS18BP1Q6P0N0 1132 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 HFE2Q6ZVN8 426 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 PLPPR4Q7Z2D5 763 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 BRAPQ7Z569 592 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 TMCO2Q7Z6W1 182 aaPredicted RBP17.46■□□□□ 0.39
LINC01220-201ENST00000558575 SESTD1Q86VW0 696 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 SMAP1Q8IYB5 467 aaPredicted RBP17.46■□□□□ 0.39
LINC01220-201ENST00000558575 AFAP1L1Q8TED9 768 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 SEZ6LQ9BYH1 1024 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.39
LINC01220-201ENST00000558575 MAFBQ9Y5Q3 323 aaPredicted RBP17.46■□□□□ 0.39
LINC01220-201ENST00000558575 CACNA1HO95180 2353 aa17.45■□□□□ 0.38
LINC01220-201ENST00000558575 WDR64B1ANS9 1081 aa17.45■□□□□ 0.38
LINC01220-201ENST00000558575 BAG4O95429 457 aaKnown RBP17.45■□□□□ 0.38
LINC01220-201ENST00000558575 ZNF200P98182 395 aaPredicted RBP17.45■□□□□ 0.38
LINC01220-201ENST00000558575 PTGDRQ13258 359 aa17.45■□□□□ 0.38
LINC01220-201ENST00000558575 PLCB4Q15147 1175 aa17.45■□□□□ 0.38
LINC01220-201ENST00000558575 IL17AQ16552 155 aa17.45■□□□□ 0.38
LINC01220-201ENST00000558575 GDF6Q6KF10 455 aaPredicted RBP17.45■□□□□ 0.38
LINC01220-201ENST00000558575 SLFN12Q8IYM2 578 aa17.45■□□□□ 0.38
LINC01220-201ENST00000558575 GLG1Q92896 1179 aa17.45■□□□□ 0.38
LINC01220-201ENST00000558575 TTC12Q9H892 705 aaPredicted RBP17.45■□□□□ 0.38
LINC01220-201ENST00000558575 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
LINC01220-201ENST00000558575 ZDHHC9Q9Y397 364 aa17.45■□□□□ 0.38
LINC01220-201ENST00000558575 MICAL3Q7RTP6 2002 aa17.45■□□□□ 0.38
LINC01220-201ENST00000558575 GRXCR2A6NFK2 248 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 ZNF862O60290 1169 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 MARCH6O60337 910 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 STBD1O95210 358 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 PSAPP07602 524 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 OR52Z1P0C646 297 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 SMIM10L2AP0DMW4 78 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 SMIM10L2BP0DMW5 78 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 MARK3P27448 753 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 HOXC8P31273 242 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 SFNP31947 248 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 JAK3P52333 1124 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 PTPN11Q06124 597 aaPredicted RBP17.44■□□□□ 0.38
LINC01220-201ENST00000558575 UGCGQ16739 394 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 FAM47CQ5HY64 1035 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 FOXD4L5Q5VV16 416 aaPredicted RBP17.44■□□□□ 0.38
LINC01220-201ENST00000558575 MIER3Q7Z3K6 550 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 RDM1Q8NG50 284 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 FOXD4L4Q8WXT5 416 aaPredicted RBP17.44■□□□□ 0.38
LINC01220-201ENST00000558575 KATNAL1Q9BW62 490 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 SUGCTQ9HAC7 445 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 ZNF302Q9NR11 478 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 ERAP1Q9NZ08 941 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 GABBR1Q9UBS5 961 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 GTF2IRD1Q9UHL9 959 aa17.44■□□□□ 0.38
LINC01220-201ENST00000558575 RBAK-RBAKDNI3L0D1 243 aa17.43■□□□□ 0.38
LINC01220-201ENST00000558575 BACH1O14867 736 aa17.43■□□□□ 0.38
LINC01220-201ENST00000558575 ZSCAN22P10073 491 aaPredicted RBP17.43■□□□□ 0.38
LINC01220-201ENST00000558575 ADAM17P78536 824 aa17.43■□□□□ 0.38
LINC01220-201ENST00000558575 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
LINC01220-201ENST00000558575 C7orf31Q8N865 590 aa17.43■□□□□ 0.38
LINC01220-201ENST00000558575 FTOQ9C0B1 505 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC01220-201ENST00000558575 AZI2Q9H6S1 392 aa17.43■□□□□ 0.38
LINC01220-201ENST00000558575 SETD4Q9NVD3 440 aa17.43■□□□□ 0.38
LINC01220-201ENST00000558575 ZNF215Q9UL58 517 aaPredicted RBP17.43■□□□□ 0.38
LINC01220-201ENST00000558575 MTUS1Q9ULD2 1270 aa17.43■□□□□ 0.38
LINC01220-201ENST00000558575 SAMM50Q9Y512 469 aa17.43■□□□□ 0.38
LINC01220-201ENST00000558575 PLXNA3P51805 1871 aa17.43■□□□□ 0.38
LINC01220-201ENST00000558575 IQCF3P0C7M6 154 aa17.42■□□□□ 0.38
LINC01220-201ENST00000558575 RFC2P35250 354 aa17.42■□□□□ 0.38
LINC01220-201ENST00000558575 DDIT3P35638 169 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms