RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 MTHFD1LQ6UB35 978 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 DNAJB3Q8WWF6 145 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 SEPT8Q92599 483 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 APBB2Q92870 758 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 VWCEQ96DN2 955 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 UIMC1Q96RL1 719 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 SLC9A7Q96T83 725 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 SEMA6BQ9H3T3 888 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 UNC45AQ9H3U1 944 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 NOL7Q9UMY1 257 aaKnown RBP9.54□□□□□ -0.88
TPM1-213ENST00000558400 SMC3Q9UQE7 1217 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 DNAH12Q6ZR08 3092 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 MYO9BQ13459 2157 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 H3BQV1 296 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 GALR2O43603 387 aaPredicted RBP9.53□□□□□ -0.88
TPM1-213ENST00000558400 CHMP2AO43633 222 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 SLC37A4O43826 429 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 NEMFO60524 1076 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 OATP04181 439 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 ATP4AP20648 1035 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 U2AF2P26368 475 aaKnown RBP eCLIP9.53□□□□□ -0.88
TPM1-213ENST00000558400 QARSP47897 775 aaKnown RBP9.53□□□□□ -0.88
TPM1-213ENST00000558400 GUCY1B3Q02153 619 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 CALCRLQ16602 461 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 PLEKHG4Q58EX7 1191 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 EARS2Q5JPH6 523 aaKnown RBP9.53□□□□□ -0.88
TPM1-213ENST00000558400 TRAF7Q6Q0C0 670 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 OTUD6AQ7L8S5 288 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 NOSTRINQ8IVI9 506 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 DBF4BQ8NFT6 615 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 HAS1Q92839 578 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 WNT8BQ93098 351 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 JPH2Q9BR39 696 aaPredicted RBP9.53□□□□□ -0.88
TPM1-213ENST00000558400 NIFKQ9BYG3 293 aaKnown RBP9.53□□□□□ -0.88
TPM1-213ENST00000558400 CXXC1Q9P0U4 656 aaPredicted RBP9.53□□□□□ -0.88
TPM1-213ENST00000558400 PPME1Q9Y570 386 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 PIEZO1Q92508 2521 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 KAT6AQ92794 2004 aa9.53□□□□□ -0.88
TPM1-213ENST00000558400 CHRNA1P02708 482 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 PDCP20941 246 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 GJB2P29033 226 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 DNM2P50570 870 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 FOSBP53539 338 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 MRPS6P82932 125 aaKnown RBP9.52□□□□□ -0.89
TPM1-213ENST00000558400 LARP1BQ659C4 914 aaKnown RBP9.52□□□□□ -0.89
TPM1-213ENST00000558400 RUFY4Q6ZNE9 571 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 C4orf19Q8IY42 314 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 KIAA0319LQ8IZA0 1049 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 METTL13Q8N6R0 699 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 TIFAQ96CG3 184 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 MTMR9Q96QG7 549 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 PHF12Q96QT6 1004 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 MAP7D2Q96T17 732 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 FTHL17Q9BXU8 183 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 IFIH1Q9BYX4 1025 aaKnown RBP9.52□□□□□ -0.89
TPM1-213ENST00000558400 CELF4Q9BZC1 486 aaKnown RBP9.52□□□□□ -0.89
TPM1-213ENST00000558400 FAM49AQ9H0Q0 323 aaPredicted RBP9.52□□□□□ -0.89
TPM1-213ENST00000558400 ZSWIM4Q9H7M6 989 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 TTC12Q9H892 705 aaPredicted RBP9.52□□□□□ -0.89
TPM1-213ENST00000558400 SLC28A3Q9HAS3 691 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 PCDHA11Q9Y5I1 949 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 STK24Q9Y6E0 443 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 IGSF9BQ9UPX0 1349 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 KDM3AQ9Y4C1 1321 aa9.52□□□□□ -0.89
TPM1-213ENST00000558400 FAM205CA6NFA0 338 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 DDX11L8A8MPP1 907 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 ZBTB42B2RXF5 422 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 LAD1O00515 517 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 ZNF862O60290 1169 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 CD2BP2O95400 341 aaKnown RBP9.51□□□□□ -0.89
TPM1-213ENST00000558400 AMHP03971 560 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 CTSHP09668 335 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 XRCC6P12956 609 aaKnown RBP eCLIP9.51□□□□□ -0.89
TPM1-213ENST00000558400 PDIA4P13667 645 aaKnown RBP9.51□□□□□ -0.89
TPM1-213ENST00000558400 ATP2B1P20020 1258 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 DNAJB2P25686 324 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 MCM7P33993 719 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 TXKP42681 527 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 PRKCEQ02156 737 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 MGAT3Q09327 533 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 TBC1D8BQ0IIM8 1120 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 CUL4AQ13619 759 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 MBTPS1Q14703 1052 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 RILPL1Q5EBL4 403 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 FBXO47Q5MNV8 452 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 MCTP1Q6DN14 999 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 EFCAB12Q6NXP0 572 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 TSHZ1Q6ZSZ6 1077 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 TRMT1LQ7Z2T5 733 aaKnown RBP9.51□□□□□ -0.89
TPM1-213ENST00000558400 NEK9Q8TD19 979 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 TRAPPC12Q8WVT3 735 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 GJA10Q969M2 543 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 INTS4Q96HW7 963 aaKnown RBP9.51□□□□□ -0.89
TPM1-213ENST00000558400 ZBED2Q9BTP6 218 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 PBX4Q9BYU1 374 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 TTYH1Q9H313 450 aaPredicted RBP9.51□□□□□ -0.89
TPM1-213ENST00000558400 ZNF576Q9H609 170 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 VAV3Q9UKW4 847 aa9.51□□□□□ -0.89
TPM1-213ENST00000558400 ARIH1Q9Y4X5 557 aaPredicted RBP9.51□□□□□ -0.89
TPM1-213ENST00000558400 TRPV2Q9Y5S1 764 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms