RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CDC25AP30304 524 aa28.58■■■□□ 2.17
SMAD6-202ENST00000557916 THPOP40225 353 aa28.58■■■□□ 2.17
SMAD6-202ENST00000557916 NUCB2P80303 420 aa28.58■■■□□ 2.17
SMAD6-202ENST00000557916 MDM2Q00987 491 aaPredicted RBP28.58■■■□□ 2.17
SMAD6-202ENST00000557916 RBL2Q08999 1139 aa28.58■■■□□ 2.17
SMAD6-202ENST00000557916 TARBP2Q15633 366 aaKnown RBP28.58■■■□□ 2.17
SMAD6-202ENST00000557916 PLA2G4FQ68DD2 849 aa28.58■■■□□ 2.17
SMAD6-202ENST00000557916 ATL3Q6DD88 541 aa28.58■■■□□ 2.17
SMAD6-202ENST00000557916 MFSD5Q6N075 450 aa28.58■■■□□ 2.17
SMAD6-202ENST00000557916 CKBP12277 381 aa28.57■■■□□ 2.16
SMAD6-202ENST00000557916 CCL23P55773 120 aa28.57■■■□□ 2.16
SMAD6-202ENST00000557916 LINC00301Q8NCQ3 95 aa28.57■■■□□ 2.16
SMAD6-202ENST00000557916 AK8Q96MA6 479 aa28.57■■■□□ 2.16
SMAD6-202ENST00000557916 WNT8AQ9H1J5 351 aa28.57■■■□□ 2.16
SMAD6-202ENST00000557916 CYP26B1Q9NR63 512 aa28.57■■■□□ 2.16
SMAD6-202ENST00000557916 MORC2Q9Y6X9 1032 aaPredicted RBP28.57■■■□□ 2.16
SMAD6-202ENST00000557916 MYH15Q9Y2K3 1946 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 SMIM35A0A1B0GVV1 85 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 MAGEB2O15479 319 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 MUTP22033 750 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 LONP1P36776 959 aaKnown RBP28.56■■■□□ 2.16
SMAD6-202ENST00000557916 MAGEA10P43363 369 aaPredicted RBP28.56■■■□□ 2.16
SMAD6-202ENST00000557916 NPEPPSP55786 919 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 DNM1Q05193 864 aaKnown RBP28.56■■■□□ 2.16
SMAD6-202ENST00000557916 GRIN1Q05586 938 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 TBC1D8BQ0IIM8 1120 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 TMEM199Q8N511 208 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 DNAJB3Q8WWF6 145 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 CEP170P1Q96L14 293 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 FAM49AQ9H0Q0 323 aaPredicted RBP28.56■■■□□ 2.16
SMAD6-202ENST00000557916 FBXO2Q9UK22 296 aaPredicted RBP28.56■■■□□ 2.16
SMAD6-202ENST00000557916 CFAP45Q9UL16 551 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 ATP6V1DQ9Y5K8 247 aa28.56■■■□□ 2.16
SMAD6-202ENST00000557916 SRPRBQ9Y5M8 271 aaKnown RBP28.56■■■□□ 2.16
SMAD6-202ENST00000557916 SELPP16109 830 aa28.55■■■□□ 2.16
SMAD6-202ENST00000557916 XKR9Q5GH70 373 aa28.55■■■□□ 2.16
SMAD6-202ENST00000557916 ZNF618Q5T7W0 954 aa28.55■■■□□ 2.16
SMAD6-202ENST00000557916 POTEGQ6S5H5 508 aa28.55■■■□□ 2.16
SMAD6-202ENST00000557916 RSPH3Q86UC2 560 aa28.55■■■□□ 2.16
SMAD6-202ENST00000557916 PIGOQ8TEQ8 1089 aa28.55■■■□□ 2.16
SMAD6-202ENST00000557916 NACC1Q96RE7 527 aa28.55■■■□□ 2.16
SMAD6-202ENST00000557916 CEP89Q96ST8 783 aa28.55■■■□□ 2.16
SMAD6-202ENST00000557916 MMTAG2Q9BU76 263 aaKnown RBP28.55■■■□□ 2.16
SMAD6-202ENST00000557916 ANKEF1Q9NU02 776 aa28.55■■■□□ 2.16
SMAD6-202ENST00000557916 A0A087WWV3 80 aa28.54■■■□□ 2.16
SMAD6-202ENST00000557916 SPTLC2O15270 562 aa28.54■■■□□ 2.16
SMAD6-202ENST00000557916 YEATS4O95619 227 aa28.54■■■□□ 2.16
SMAD6-202ENST00000557916 XRCC6P12956 609 aaKnown RBP eCLIP28.54■■■□□ 2.16
SMAD6-202ENST00000557916 ECM1Q16610 540 aa28.54■■■□□ 2.16
SMAD6-202ENST00000557916 LRRC8DQ7L1W4 858 aa28.54■■■□□ 2.16
SMAD6-202ENST00000557916 RPAINQ86UA6 219 aa28.54■■■□□ 2.16
SMAD6-202ENST00000557916 METTL13Q8N6R0 699 aa28.54■■■□□ 2.16
SMAD6-202ENST00000557916 ZNF579Q8NAF0 562 aaKnown RBP28.54■■■□□ 2.16
SMAD6-202ENST00000557916 SCLYQ96I15 445 aa28.54■■■□□ 2.16
SMAD6-202ENST00000557916 CAND2O75155 1236 aa28.53■■■□□ 2.16
SMAD6-202ENST00000557916 RPLP2P05387 115 aaKnown RBP28.53■■■□□ 2.16
SMAD6-202ENST00000557916 IQCF3P0C7M6 154 aa28.53■■■□□ 2.16
SMAD6-202ENST00000557916 FPGSQ05932 587 aa28.53■■■□□ 2.16
SMAD6-202ENST00000557916 CSRNP2Q9H175 543 aa28.53■■■□□ 2.16
SMAD6-202ENST00000557916 KIAA1024Q9UPX6 916 aa28.53■■■□□ 2.16
SMAD6-202ENST00000557916 PPME1Q9Y570 386 aa28.53■■■□□ 2.16
SMAD6-202ENST00000557916 LTBP2Q14767 1821 aa28.53■■■□□ 2.16
SMAD6-202ENST00000557916 CSF2RAP15509 400 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 UBA7P41226 1012 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 EFCAB12Q6NXP0 572 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 KIAA0319LQ8IZA0 1049 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 KRI1Q8N9T8 703 aaKnown RBP28.52■■■□□ 2.16
SMAD6-202ENST00000557916 CCDC43Q96MW1 224 aaKnown RBP28.52■■■□□ 2.16
SMAD6-202ENST00000557916 CLIC6Q96NY7 704 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 SUGCTQ9HAC7 445 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 DDX19AQ9NUU7 478 aaKnown RBP28.52■■■□□ 2.16
SMAD6-202ENST00000557916 RSPH10B2B2RC85 870 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 PPP6R2O75170 966 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 MAFO75444 373 aaPredicted RBP28.52■■■□□ 2.16
SMAD6-202ENST00000557916 CTSHP09668 335 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 RSPH10BP0C881 870 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 ZRSR1Q15695 479 aaKnown RBP28.52■■■□□ 2.16
SMAD6-202ENST00000557916 PRPF38BQ5VTL8 546 aaKnown RBP28.52■■■□□ 2.16
SMAD6-202ENST00000557916 CABP7Q86V35 215 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 NME8Q8N427 588 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 GDF15Q99988 308 aa28.52■■■□□ 2.16
SMAD6-202ENST00000557916 KDM3AQ9Y4C1 1321 aa28.51■■■□□ 2.15
SMAD6-202ENST00000557916 TMOD1P28289 359 aa28.51■■■□□ 2.15
SMAD6-202ENST00000557916 PPIGQ13427 754 aaKnown RBP eCLIP28.51■■■□□ 2.15
SMAD6-202ENST00000557916 TRAF7Q6Q0C0 670 aa28.51■■■□□ 2.15
SMAD6-202ENST00000557916 LRRC71Q8N4P6 559 aa28.51■■■□□ 2.15
SMAD6-202ENST00000557916 SLC7A3Q8WY07 619 aa28.51■■■□□ 2.15
SMAD6-202ENST00000557916 JPH2Q9BR39 696 aaPredicted RBP28.51■■■□□ 2.15
SMAD6-202ENST00000557916 DBR1Q9UK59 544 aaKnown RBP28.51■■■□□ 2.15
SMAD6-202ENST00000557916 IGKV6-21A0A0C4DH24 114 aa28.5■■■□□ 2.15
SMAD6-202ENST00000557916 NCLP19338 710 aaKnown RBP28.5■■■□□ 2.15
SMAD6-202ENST00000557916 RFC5P40937 340 aa28.5■■■□□ 2.15
SMAD6-202ENST00000557916 RARRES1P49788 294 aa28.5■■■□□ 2.15
SMAD6-202ENST00000557916 CLCN3P51790 818 aa28.5■■■□□ 2.15
SMAD6-202ENST00000557916 POLGP54098 1239 aaPredicted RBP28.5■■■□□ 2.15
SMAD6-202ENST00000557916 SPECC1Q5M775 1068 aa28.5■■■□□ 2.15
SMAD6-202ENST00000557916 EXOC8Q8IYI6 725 aa28.5■■■□□ 2.15
SMAD6-202ENST00000557916 LINC01465Q8N7H1 131 aa28.5■■■□□ 2.15
SMAD6-202ENST00000557916 KCNG4Q8TDN1 519 aa28.5■■■□□ 2.15
SMAD6-202ENST00000557916 CDK5RAP3Q96JB5 506 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms