RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 SLC5A5Q92911 643 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 FAXDC2Q96IV6 333 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 CAPNS2Q96L46 248 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 Q96M66 194 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 LRGUKQ96M69 825 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 FCRL3Q96P31 734 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 FAM83CQ9BQN1 747 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 YIPF2Q9BWQ6 316 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 TCF7L1Q9HCS4 588 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 PNMA8BQ9ULN7 279 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 GIT1Q9Y2X7 761 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 PKD1L3Q7Z443 1732 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 LRRIQ1Q96JM4 1722 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 DUOX2Q9NRD8 1548 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 SBF2Q86WG5 1849 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 ZFYVE9O95405 1425 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 RIMS2Q9UQ26 1411 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 SHISA3A0PJX4 238 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 H0YGN5 161 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 SOD2P04179 222 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 IFIT2P09913 472 aaKnown RBP6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 TRIM27P14373 513 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 MECP2P51608 486 aaKnown RBP6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 KCNAB2Q13303 367 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 DHX8Q14562 1220 aaKnown RBP6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 TESK1Q15569 626 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 KIZQ2M2Z5 673 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 LONRF3Q496Y0 759 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 SGO2Q562F6 1265 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 IL31Q6EBC2 164 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 DEFB123Q8N688 67 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 C2orf69Q8N8R5 385 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 RCBTB1Q8NDN9 531 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 FBXW5Q969U6 566 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 KRTAP4-12Q9BQ66 201 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 IPPKQ9H8X2 491 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 OXSMQ9NWU1 459 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 MKS1Q9NXB0 559 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 USP25Q9UHP3 1055 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 RCAN3Q9UKA8 241 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 PAPPAQ13219 1627 aa6.17□□□□□ -1.42
MTHFD1-216ENST00000557539 HFM1A2PYH4 1435 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 FMN2Q9NZ56 1722 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 COL14A1Q05707 1796 aaKnown RBP6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 GLTPD2A6NH11 291 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 IFRD1O00458 451 aaPredicted RBP6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 COBLO75128 1261 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 LEFTY1O75610 366 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 CFBP00751 764 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 PAX3P23760 479 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 CYP2C19P33261 490 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 ECE1P42892 770 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 MRE11P49959 708 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 NEK3P51956 506 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 ODF1Q14990 250 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 ARHGAP29Q52LW3 1261 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 TMEM240Q5SV17 173 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 SFRP5Q5T4F7 317 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 BROXQ5VW32 411 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 DBNDD2Q9BQY9 259 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 SARGQ9BW04 601 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 HDAC8Q9BY41 377 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 PRDM5Q9NQX1 630 aaPredicted RBP6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 CATSPERZQ9NTU4 200 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 PCDHA2Q9Y5H9 948 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 MRFAP1Q9Y605 127 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 NRXN3Q9Y4C0 1643 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 MUC6Q6W4X9 2439 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 KIAA1107Q9UPP5 1409 aa6.16□□□□□ -1.42
MTHFD1-216ENST00000557539 GSTA4O15217 222 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 XPOTO43592 962 aaKnown RBP6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 IL33O95760 270 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 LTFP02788 710 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 GSTM1P09488 218 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 RBP3P10745 1247 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 SPINK2P20155 84 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 SCAND1P57086 179 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 PICALMQ13492 652 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 GRM3Q14832 879 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 ZRSR2Q15696 482 aaKnown RBP6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 CREB3L3Q68CJ9 461 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 IQCEQ6IPM2 695 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 CYP4F22Q6NT55 531 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 EPM2AIP1Q7L775 607 aaPredicted RBP6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 EFHBQ8N7U6 833 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 PJA1Q8NG27 643 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 SHKBP1Q8TBC3 707 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 HSPBAP1Q96EW2 488 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 CHAMP1Q96JM3 812 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 COX4I2Q96KJ9 171 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 DUSP23Q9BVJ7 150 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 SLC12A9Q9BXP2 914 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 KCNF1Q9H3M0 494 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 ANLNQ9NQW6 1124 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 GPATCH2Q9NW75 528 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 PPARGC1AQ9UBK2 798 aaKnown RBP6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 INTUQ9ULD6 942 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 FAM50BQ9Y247 325 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 ZNF652Q9Y2D9 606 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms