RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 FGFR1P11362 822 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 IBSPP21815 317 aaPredicted RBP11.98□□□□□ -0.49
TRAV33-201ENST00000557514 IGBP1P78318 339 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 TMEM62Q0P6H9 643 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 SMC1AQ14683 1233 aaKnown RBP11.98□□□□□ -0.49
TRAV33-201ENST00000557514 CCDC178Q5BJE1 867 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 ATAT1Q5SQI0 421 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 XRRA1Q6P2D8 792 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 SLC24A5Q71RS6 500 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 TMC7Q7Z402 723 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 ZNF589Q86UQ0 364 aaPredicted RBP11.98□□□□□ -0.49
TRAV33-201ENST00000557514 IQCA1Q86XH1 822 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 STAG2Q8N3U4 1231 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 SUMF1Q8NBK3 374 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 GIMAP8Q8ND71 665 aaPredicted RBP11.98□□□□□ -0.49
TRAV33-201ENST00000557514 RIN2Q8WYP3 895 aaPredicted RBP11.98□□□□□ -0.49
TRAV33-201ENST00000557514 RGS18Q9NS28 235 aa11.98□□□□□ -0.49
TRAV33-201ENST00000557514 CEP295Q9C0D2 2601 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 ZFYVE26Q68DK2 2539 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 GSTTP1A0A1W2PQM5 241 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 KRBA1A5PL33 1030 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 RRN3P2A6NIE6 340 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 CCER2I3L3R5 266 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 SP9P0CG40 484 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 INSRRP14616 1297 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 KCNA2P16389 499 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 SDHBP21912 280 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 PBX3P40426 434 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 ATXN1P54253 815 aaKnown RBP11.97□□□□□ -0.49
TRAV33-201ENST00000557514 SLC35G1Q2M3R5 365 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 KIAA0319Q5VV43 1072 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 KCNT2Q6UVM3 1135 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 CCDC149Q6ZUS6 474 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 OTOP3Q7RTS5 596 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 LRRC43Q8N309 656 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 C12orf76Q8N812 135 aaPredicted RBP11.97□□□□□ -0.49
TRAV33-201ENST00000557514 FAM227BQ96M60 508 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 ZNF558Q96NG5 402 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 ZSCAN10Q96SZ4 725 aaPredicted RBP11.97□□□□□ -0.49
TRAV33-201ENST00000557514 ADAM2Q99965 735 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 TMEM117Q9H0C3 514 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 KCNK12Q9HB15 430 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 TMEM161AQ9NX61 479 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 RTEL1Q9NZ71 1219 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 PCDHA2Q9Y5H9 948 aa11.97□□□□□ -0.49
TRAV33-201ENST00000557514 FASNP49327 2511 aaKnown RBP11.97□□□□□ -0.49
TRAV33-201ENST00000557514 ZZEF1O43149 2961 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 SALL3Q9BXA9 1300 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 DENND3A2RUS2 1198 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 KLRF2D3W0D1 207 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 KRT76Q01546 638 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 KRT17Q04695 432 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 TBC1D8BQ0IIM8 1120 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 NFX1Q12986 1120 aaKnown RBP11.96□□□□□ -0.49
TRAV33-201ENST00000557514 TRAF1Q13077 416 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 PCNX4Q63HM2 1172 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 LRRC55Q6ZSA7 311 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 FEZF2Q8TBJ5 459 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 TMEM40Q8WWA1 233 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 SEPT1Q8WYJ6 367 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 GLG1Q92896 1179 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 ACSF2Q96CM8 615 aaPredicted RBP11.96□□□□□ -0.49
TRAV33-201ENST00000557514 SMARCAD1Q9H4L7 1026 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 ELAC1Q9H777 363 aaKnown RBP11.96□□□□□ -0.49
TRAV33-201ENST00000557514 ATP6V0A4Q9HBG4 840 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 RNF19AQ9NV58 838 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 DLGAP2Q9P1A6 1054 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 WNT16Q9UBV4 365 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 SPEGQ15772 3267 aa11.96□□□□□ -0.49
TRAV33-201ENST00000557514 FRYQ5TBA9 3013 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 SMIM35A0A1B0GVV1 85 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 NARSO43776 548 aaKnown RBP11.95□□□□□ -0.5
TRAV33-201ENST00000557514 ATP9AO75110 1047 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 ADRB1P08588 477 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 MX1P20591 662 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 FAM189BP81408 668 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 MCMDC2Q4G0Z9 681 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 KANK3Q6NY19 840 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 HOMER1Q86YM7 354 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 SLC39A11Q8N1S5 342 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 GPRASP2Q96D09 838 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 CASD1Q96PB1 797 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 PCYT2Q99447 389 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 TBC1D17Q9HA65 648 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 SPG21Q9NZD8 308 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 IGSF9Q9P2J2 1179 aa11.95□□□□□ -0.5
TRAV33-201ENST00000557514 NOC2LQ9Y3T9 749 aaKnown RBP11.95□□□□□ -0.5
TRAV33-201ENST00000557514 HOXA2O43364 376 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 KINO60870 393 aaKnown RBP11.94□□□□□ -0.5
TRAV33-201ENST00000557514 RPS6KA5O75582 802 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 EPCAMP16422 314 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 LMNB2Q03252 620 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 TMC5Q6UXY8 1006 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 GPR149Q86SP6 731 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 NLRX1Q86UT6 975 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 C1orf210Q8IVY1 113 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 NME8Q8N427 588 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 TRAPPC12Q8WVT3 735 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 EVI5LQ96CN4 794 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 CDHR1Q96JP9 859 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms