RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 VAT1LQ9HCJ6 419 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 EVA1BQ9NVM1 165 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 LIMD1Q9UGP4 676 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 CACNA1HO95180 2353 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 CCDC171Q6TFL3 1326 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 MYH7BA7E2Y1 1941 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 STXBP3O00186 592 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 LINC01565O15544 149 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 CAND2O75155 1236 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 RB1P06400 928 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 PARP1P09874 1014 aaKnown RBP6.78□□□□□ -1.32
VPS33B-207ENST00000557470 TGFB3P10600 412 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 BMPR1AP36894 532 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 PDE1AP54750 535 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 SH3BP2P78314 561 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 GHRHRQ02643 423 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 LINC01559Q495D7 138 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 KCNV1Q6PIU1 500 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 STOX1Q6ZVD7 989 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 VSIG10LQ86VR7 867 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 IQCA1Q86XH1 822 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 TRIM50Q86XT4 487 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 ENAHQ8N8S7 591 aaPredicted RBP6.78□□□□□ -1.32
VPS33B-207ENST00000557470 BAP1Q92560 729 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 EDAQ92838 391 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 HPS1Q92902 700 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 ZSCAN10Q96SZ4 725 aaPredicted RBP6.78□□□□□ -1.32
VPS33B-207ENST00000557470 AMNQ9BXJ7 453 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 LMAN2LQ9H0V9 348 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 IGFLR1Q9H665 355 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 MLXIPQ9HAP2 919 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 SETD4Q9NVD3 440 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 TFIP11Q9UBB9 837 aaKnown RBP6.78□□□□□ -1.32
VPS33B-207ENST00000557470 CD207Q9UJ71 328 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 SUPT16HQ9Y5B9 1047 aaKnown RBP6.78□□□□□ -1.32
VPS33B-207ENST00000557470 RALGAPA2Q2PPJ7 1873 aa6.78□□□□□ -1.32
VPS33B-207ENST00000557470 ADGRA3Q8IWK6 1321 aa6.77□□□□□ -1.32
VPS33B-207ENST00000557470 TMEM221A6NGB7 291 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 B4E1Z4 1266 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 M0R296 226 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 NOP56O00567 594 aaKnown RBP6.77□□□□□ -1.33
VPS33B-207ENST00000557470 SIAH2O43255 324 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 AP1G2O75843 785 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 CHRNA1P02708 482 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 MMP1P03956 469 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 GHRP10912 638 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 VAMP1P23763 118 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 CCND2P30279 289 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 SMCPP49901 116 aaPredicted RBP6.77□□□□□ -1.33
VPS33B-207ENST00000557470 ADAM17P78536 824 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 ARHGAP4P98171 946 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 KCNH2Q12809 1159 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 TCF15Q12870 199 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 ADAM15Q13444 863 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 CAMK1Q14012 370 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 QPCTQ16769 361 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 SLC35G1Q2M3R5 365 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 NAALADL2Q58DX5 795 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 CCDC178Q5BJE1 867 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 FAM26DQ5JW98 314 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 DESI1Q6ICB0 168 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 RUFY4Q6ZNE9 571 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 ADGRD2Q7Z7M1 963 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 STAG2Q8N3U4 1231 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 LMBR1Q8WVP7 490 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 CLP1Q92989 425 aaKnown RBP6.77□□□□□ -1.33
VPS33B-207ENST00000557470 MTMR8Q96EF0 704 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 MSLNLQ96KJ4 702 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 USP26Q9BXU7 913 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 ALG13Q9NP73 1137 aaKnown RBP6.77□□□□□ -1.33
VPS33B-207ENST00000557470 RWDD3Q9Y3V2 267 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 TELO2Q9Y4R8 837 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 PCDHA1Q9Y5I3 950 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 SPTBN4Q9H254 2564 aa6.77□□□□□ -1.33
VPS33B-207ENST00000557470 KLRF2D3W0D1 207 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 GCOM1H8Y6P7 765 aaPredicted RBP6.76□□□□□ -1.33
VPS33B-207ENST00000557470 ZNF213O14771 459 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 ZBTB5O15062 677 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 EYA4O95677 639 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 POLR2MP0CAP2 368 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 GNAT1P11488 350 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 DNAJB1P25685 340 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 NDUFV1P49821 464 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 MRPS9P82933 396 aaKnown RBP6.76□□□□□ -1.33
VPS33B-207ENST00000557470 ZXDAP98168 799 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 SEMA3FQ13275 785 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 BTG3Q14201 252 aaPredicted RBP6.76□□□□□ -1.33
VPS33B-207ENST00000557470 LPIN1Q14693 890 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 ANKRD45Q5TZF3 282 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 METTL7BQ6UX53 244 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 LYPD8Q6UX82 237 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 CYFIP1Q7L576 1253 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 BMP8AQ7Z5Y6 402 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 FCHSD1Q86WN1 690 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 SMRP1Q8NCR6 262 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 EHBP1Q8NDI1 1231 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 LINC01599Q8WXQ3 324 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 ZNF689Q96CS4 500 aaPredicted RBP6.76□□□□□ -1.33
VPS33B-207ENST00000557470 INPP4AQ96PE3 977 aaPredicted RBP6.76□□□□□ -1.33
VPS33B-207ENST00000557470 GPR20Q99678 358 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms