RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 MCM4P33991 863 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 NPEPPSP55786 919 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 UBE2HP62256 183 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 ITGA7Q13683 1181 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 HIC1Q14526 733 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 E2F4Q16254 413 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 NAALADL2Q58DX5 795 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 RRAGBQ5VZM2 374 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 TRAPPC12Q8WVT3 735 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 NIFKQ9BYG3 293 aaKnown RBP19.44■□□□□ 0.7
TUBB3-211ENST00000556536 SENP6Q9GZR1 1112 aaPredicted RBP19.44■□□□□ 0.7
TUBB3-211ENST00000556536 STARD7Q9NQZ5 370 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 BLOC1S4Q9NUP1 217 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 HDAC6Q9UBN7 1215 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 DNM3Q9UQ16 869 aa19.44■□□□□ 0.7
TUBB3-211ENST00000556536 A0A1W2PPC1 479 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 HBP1O60381 514 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 CAPN2P17655 700 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 LIG1P18858 919 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 PPFIA1Q13136 1202 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 MTERF2Q49AM1 385 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 CCDC73Q6ZRK6 1079 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 C7orf31Q8N865 590 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 DHX58Q96C10 678 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 ZBTB10Q96DT7 871 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 PAWRQ96IZ0 340 aaKnown RBP19.43■□□□□ 0.7
TUBB3-211ENST00000556536 CEP89Q96ST8 783 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 ANKEF1Q9NU02 776 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 SETD4Q9NVD3 440 aa19.43■□□□□ 0.7
TUBB3-211ENST00000556536 GOLGA6L22H0YM25 854 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 EYA4O95677 639 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 XRCC6P12956 609 aaKnown RBP eCLIP19.42■□□□□ 0.7
TUBB3-211ENST00000556536 STAT6P42226 847 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 RARRES1P49788 294 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 IGBP1P78318 339 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 TARBP2Q15633 366 aaKnown RBP19.42■□□□□ 0.7
TUBB3-211ENST00000556536 GRIK4Q16099 956 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 XKR9Q5GH70 373 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 OTUD6AQ7L8S5 288 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 SLC43A3Q8NBI5 491 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 ENGASEQ8NFI3 743 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 RAD54LQ92698 747 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 CEP170P1Q96L14 293 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 BHMT2Q9H2M3 363 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 CYP26B1Q9NR63 512 aa19.42■□□□□ 0.7
TUBB3-211ENST00000556536 DBR1Q9UK59 544 aaKnown RBP19.42■□□□□ 0.7
TUBB3-211ENST00000556536 A0A0C4DFX4 3053 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 A0A0U1RQG5 324 aaPredicted RBP19.41■□□□□ 0.7
TUBB3-211ENST00000556536 PLA2G4BP0C869 781 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 HOXC8P31273 242 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 SYKP43405 635 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 ZNF200P98182 395 aaPredicted RBP19.41■□□□□ 0.7
TUBB3-211ENST00000556536 MCM6Q14566 821 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 FAM47CQ5HY64 1035 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 ZNF484Q5JVG2 852 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 MARCH8Q5T0T0 291 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 NFRKBQ6P4R8 1299 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 FMR1NBQ8N0W7 255 aaPredicted RBP19.41■□□□□ 0.7
TUBB3-211ENST00000556536 KCTD17Q8N5Z5 321 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 LMBR1Q8WVP7 490 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 C11orf49Q9H6J7 331 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 STK17AQ9UEE5 414 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 SERTAD1Q9UHV2 236 aa19.41■□□□□ 0.7
TUBB3-211ENST00000556536 C17orf102A2RUQ5 167 aa19.4■□□□□ 0.7
TUBB3-211ENST00000556536 ARHGEF35A5YM69 484 aa19.4■□□□□ 0.7
TUBB3-211ENST00000556536 SSBP05455 408 aaKnown RBP eCLIP19.4■□□□□ 0.7
TUBB3-211ENST00000556536 ATN1P54259 1190 aaPredicted RBP19.4■□□□□ 0.7
TUBB3-211ENST00000556536 SLC12A3P55017 1021 aa19.4■□□□□ 0.7
TUBB3-211ENST00000556536 SNW1Q13573 536 aaKnown RBP19.4■□□□□ 0.7
TUBB3-211ENST00000556536 DHX8Q14562 1220 aaKnown RBP19.4■□□□□ 0.7
TUBB3-211ENST00000556536 LONRF3Q496Y0 759 aa19.4■□□□□ 0.7
TUBB3-211ENST00000556536 GDF6Q6KF10 455 aaPredicted RBP19.4■□□□□ 0.7
TUBB3-211ENST00000556536 SESTD1Q86VW0 696 aa19.4■□□□□ 0.7
TUBB3-211ENST00000556536 IQUBQ8NA54 791 aa19.4■□□□□ 0.7
TUBB3-211ENST00000556536 GTF2IRD1Q9UHL9 959 aa19.4■□□□□ 0.7
TUBB3-211ENST00000556536 NRCAMQ92823 1304 aa19.4■□□□□ 0.7
TUBB3-211ENST00000556536 RRN3P2A6NIE6 340 aa19.39■□□□□ 0.69
TUBB3-211ENST00000556536 ARVCFO00192 962 aa19.39■□□□□ 0.69
TUBB3-211ENST00000556536 ACTN4O43707 911 aaKnown RBP19.39■□□□□ 0.69
TUBB3-211ENST00000556536 NR1I2O75469 434 aa19.39■□□□□ 0.69
TUBB3-211ENST00000556536 ZNF202O95125 648 aa19.39■□□□□ 0.69
TUBB3-211ENST00000556536 CDK7P50613 346 aa19.39■□□□□ 0.69
TUBB3-211ENST00000556536 ADAM17P78536 824 aa19.39■□□□□ 0.69
TUBB3-211ENST00000556536 FAM160A1Q05DH4 1040 aa19.39■□□□□ 0.69
TUBB3-211ENST00000556536 SLC39A5Q6ZMH5 540 aa19.39■□□□□ 0.69
TUBB3-211ENST00000556536 NECAB2Q7Z6G3 386 aa19.39■□□□□ 0.69
TUBB3-211ENST00000556536 SYT2Q8N9I0 419 aaPredicted RBP19.39■□□□□ 0.69
TUBB3-211ENST00000556536 LARP4BQ92615 738 aaKnown RBP19.39■□□□□ 0.69
TUBB3-211ENST00000556536 CCDC43Q96MW1 224 aaKnown RBP19.39■□□□□ 0.69
TUBB3-211ENST00000556536 BMP2KQ9NSY1 1161 aaPredicted RBP19.39■□□□□ 0.69
TUBB3-211ENST00000556536 COL1A2P08123 1366 aa19.39■□□□□ 0.69
TUBB3-211ENST00000556536 TREHO43280 583 aa19.38■□□□□ 0.69
TUBB3-211ENST00000556536 C22orf31O95567 290 aa19.38■□□□□ 0.69
TUBB3-211ENST00000556536 KLRC1P26715 233 aa19.38■□□□□ 0.69
TUBB3-211ENST00000556536 PTPN11Q06124 597 aaPredicted RBP19.38■□□□□ 0.69
TUBB3-211ENST00000556536 LAMA3Q16787 3333 aa19.38■□□□□ 0.69
TUBB3-211ENST00000556536 PADI6Q6TGC4 694 aa19.38■□□□□ 0.69
TUBB3-211ENST00000556536 STAMQ92783 540 aa19.38■□□□□ 0.69
TUBB3-211ENST00000556536 MTRQ99707 1265 aa19.38■□□□□ 0.69
TUBB3-211ENST00000556536 PYM1Q9BRP8 204 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms