RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TMEM60Q9H2L4 133 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 AZI2Q9H6S1 392 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 ZNF302Q9NR11 478 aa10.89□□□□□ -0.67
SRP54-210ENST00000556380 IGSF9BQ9UPX0 1349 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 EML1O00423 815 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 STBD1O95210 358 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 JAK3P52333 1124 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 PPFIA1Q13136 1202 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 ORC2Q13416 577 aaPredicted RBP10.88□□□□□ -0.67
SRP54-210ENST00000556380 FAM160B1Q5W0V3 765 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 PDXDC2PQ6P474 469 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 CAGE1Q8TC20 777 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 ATP8B4Q8TF62 1192 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 ATP6V0A1Q93050 837 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 PPP1R12CQ9BZL4 782 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 GABBR1Q9UBS5 961 aa10.88□□□□□ -0.67
SRP54-210ENST00000556380 BACH1O14867 736 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 CHMP2AO43633 222 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 HBP1O60381 514 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 IQCF3P0C7M6 154 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 GNAT1P11488 350 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 CKBP12277 381 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 CSF2RAP15509 400 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 CCL23P55773 120 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 FPGSQ05932 587 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 BFSP2Q13515 415 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 ZNF174Q15697 407 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 GRIK4Q16099 956 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 UGCGQ16739 394 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 TTC38Q5R3I4 469 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 MIER3Q7Z3K6 550 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 RPAINQ86UA6 219 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 SLFN12Q8IYM2 578 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 UBE2OQ9C0C9 1292 aaKnown RBP10.87□□□□□ -0.67
SRP54-210ENST00000556380 NOD1Q9Y239 953 aa10.87□□□□□ -0.67
SRP54-210ENST00000556380 TRIP12Q14669 1992 aaPredicted RBP10.86□□□□□ -0.67
SRP54-210ENST00000556380 LTBP2Q14767 1821 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 A0A1W2PPC1 479 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 RRN3P2A6NIE6 340 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 H3BQV1 296 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 NEMFO60524 1076 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 BAG4O95429 457 aaKnown RBP10.86□□□□□ -0.67
SRP54-210ENST00000556380 SYT1P21579 422 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 MCM7P33993 719 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 PRSS12P56730 875 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 PPIGQ13427 754 aaKnown RBP eCLIP10.86□□□□□ -0.678e-7■□□□□ 10.9
SRP54-210ENST00000556380 MBTPS1Q14703 1052 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 EPHA7Q15375 998 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 CALCRLQ16602 461 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 ZNF484Q5JVG2 852 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 C9orf50Q5SZB4 431 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 MCTP1Q6DN14 999 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 RUFY4Q6ZNE9 571 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 TMEM199Q8N511 208 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 TRAPPC12Q8WVT3 735 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 ZBTB10Q96DT7 871 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 SCLYQ96I15 445 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 CEP89Q96ST8 783 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 HSD17B14Q9BPX1 270 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 IL23AQ9NPF7 189 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 PCDHA12Q9UN75 941 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 SAMM50Q9Y512 469 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 PCDHB6Q9Y5E3 794 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 PCDHA2Q9Y5H9 948 aa10.86□□□□□ -0.67
SRP54-210ENST00000556380 RBAK-RBAKDNI3L0D1 243 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 CAND2O75155 1236 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 P4HBP07237 508 aaKnown RBP10.85□□□□□ -0.67
SRP54-210ENST00000556380 SELPP16109 830 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 PDCP20941 246 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 RFC2P35250 354 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 TXKP42681 527 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 GNL2Q13823 731 aaKnown RBP10.85□□□□□ -0.67
SRP54-210ENST00000556380 SHHQ15465 462 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 TARBP2Q15633 366 aaKnown RBP10.85□□□□□ -0.67
SRP54-210ENST00000556380 HABP4Q5JVS0 413 aaKnown RBP10.85□□□□□ -0.67
SRP54-210ENST00000556380 FAM26DQ5JW98 314 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 TMEM240Q5SV17 173 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 ZNF618Q5T7W0 954 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 RASIP1Q5U651 963 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 HSCBQ8IWL3 235 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 TDHQ8IZJ6 230 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 RETREG2Q8NC44 543 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 TNPO1Q92973 898 aaKnown RBP10.85□□□□□ -0.67
SRP54-210ENST00000556380 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.85□□□□□ -0.67
SRP54-210ENST00000556380 NIFKQ9BYG3 293 aaKnown RBP10.85□□□□□ -0.67
SRP54-210ENST00000556380 TTC12Q9H892 705 aaPredicted RBP10.85□□□□□ -0.67
SRP54-210ENST00000556380 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.85□□□□□ -0.67
SRP54-210ENST00000556380 WRAP73Q9P2S5 460 aaPredicted RBP10.85□□□□□ -0.67
SRP54-210ENST00000556380 TCEAL9Q9UHQ7 104 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 TUBE1Q9UJT0 475 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 NOL7Q9UMY1 257 aaKnown RBP10.85□□□□□ -0.67
SRP54-210ENST00000556380 MTMR6Q9Y217 621 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 COL1A2P08123 1366 aa10.85□□□□□ -0.67
SRP54-210ENST00000556380 MARCH6O60337 910 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 NBNO60934 754 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 SLITRK3O94933 977 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 CXCL10P02778 98 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 OATP04181 439 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 OR52Z1P0C646 297 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms