RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 TNFAIP1Q13829 316 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 MSMPQ1L6U9 139 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 SLC4A8Q2Y0W8 1093 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 CDCP2Q5VXM1 449 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 CDC42EP5Q6NZY7 148 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 HHIPL2Q6UWX4 724 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 CCDC81Q6ZN84 652 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 MIGA2Q7L4E1 593 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 NLRC3Q7RTR2 1065 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 DTX1Q86Y01 620 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 MAGEB6Q8N7X4 407 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 CPLX3Q8WVH0 158 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 GPATCH3Q96I76 525 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 SEC16BQ96JE7 1060 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 CAPNS2Q96L46 248 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 KRTAP17-1Q9BYP8 105 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 TMEM39BQ9GZU3 492 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 CNNM2Q9H8M5 875 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 PIH1D3Q9NQM4 214 aaKnown RBP5.61□□□□□ -1.51
ATXN3-237ENST00000556274 PLAGL2Q9UPG8 496 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 SUGT1Q9Y2Z0 365 aa5.61□□□□□ -1.51
ATXN3-237ENST00000556274 PITPNM2Q9BZ72 1349 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 WDR33Q9C0J8 1336 aaKnown RBP5.6□□□□□ -1.51
ATXN3-237ENST00000556274 TMEM265A0A087WTH1 108 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 KIAA1324LA8MWY0 1029 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-237ENST00000556274 PRR33A8MZF0 331 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 RBAK-RBAKDNI3L0D1 243 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 BAG3O95817 575 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 CEACAM5P06731 702 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 NME1P15531 152 aaKnown RBP5.6□□□□□ -1.51
ATXN3-237ENST00000556274 POLR2BP30876 1174 aaKnown RBP5.6□□□□□ -1.51
ATXN3-237ENST00000556274 BTDP43251 543 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 DYNLL1P63167 89 aaKnown RBP5.6□□□□□ -1.51
ATXN3-237ENST00000556274 MAP3K12Q12852 859 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 TTF1Q15361 905 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-237ENST00000556274 IFI16Q16666 785 aaKnown RBP5.6□□□□□ -1.51
ATXN3-237ENST00000556274 CDKAL1Q5VV42 579 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 TSHZ3Q63HK5 1081 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 RGMBQ6NW40 437 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 TEX11Q8IYF3 940 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 DNAJC5GQ8N7S2 189 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 MIGA1Q8NAN2 632 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 EDC3Q96F86 508 aaKnown RBP5.6□□□□□ -1.51
ATXN3-237ENST00000556274 COX4I2Q96KJ9 171 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 ZDHHC15Q96MV8 337 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 MRIQ9BWK5 157 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 SRRTQ9BXP5 876 aaKnown RBP5.6□□□□□ -1.51
ATXN3-237ENST00000556274 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 AATFQ9NY61 560 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATXN3-237ENST00000556274 OTOFQ9HC10 1997 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 NAV1Q8NEY1 1877 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 MAST2Q6P0Q8 1798 aa5.6□□□□□ -1.51
ATXN3-237ENST00000556274 SALL1Q9NSC2 1324 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 ZNFX1Q9P2E3 1918 aaKnown RBP5.59□□□□□ -1.51
ATXN3-237ENST00000556274 MYH4Q9Y623 1939 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 MEIS3P2A8K0S8 358 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 USP2O75604 605 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-237ENST00000556274 UBOX5O94941 541 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 IGHDP01880 384 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 CENPBP07199 599 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-237ENST00000556274 ATF4P18848 351 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-237ENST00000556274 SPINK2P20155 84 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 KIR3DL1P43629 444 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 RGS3P49796 1198 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 NKPD1Q17RQ9 610 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 SLC9C2Q5TAH2 1124 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 APOBEC3HQ6NTF7 200 aaKnown RBP5.59□□□□□ -1.51
ATXN3-237ENST00000556274 SAPCD2Q86UD0 394 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 MAPKAPK5Q8IW41 473 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 ZFPM1Q8IX07 1006 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 MFSD4AQ8N468 514 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 SH3RF3Q8TEJ3 882 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-237ENST00000556274 TGFBRAP1Q8WUH2 860 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 RILPL2Q969X0 211 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 NSUN4Q96CB9 384 aaKnown RBP5.59□□□□□ -1.51
ATXN3-237ENST00000556274 GCC1Q96CN9 775 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 ZBED3Q96IU2 234 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-237ENST00000556274 KREMEN1Q96MU8 473 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 SLC9A7Q96T83 725 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 LNPKQ9C0E8 428 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATXN3-237ENST00000556274 ECHDC1Q9NTX5 307 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 PAG1Q9NWQ8 432 aa5.59□□□□□ -1.51
ATXN3-237ENST00000556274 SAP30BPQ9UHR5 308 aaKnown RBP5.59□□□□□ -1.51
ATXN3-237ENST00000556274 COL1A1P02452 1464 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-237ENST00000556274 MROH7-TTC4A0A0A0MT08 1334 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 FAM86C2PA6NEL3 165 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 ERC2O15083 957 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 WNT11O96014 354 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 APPP05067 770 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 ZNF865P0CJ78 1059 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-237ENST00000556274 ATP5JP18859 108 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 CCNFP41002 786 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 KIF23Q02241 960 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-237ENST00000556274 DCAF15Q66K64 600 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 ZSCAN25Q6NSZ9 544 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 RUFY4Q6ZNE9 571 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 C22orf34Q6ZV56 151 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 SPACA3Q8IXA5 215 aa5.58□□□□□ -1.52
ATXN3-237ENST00000556274 STK11IPQ8N1F8 1099 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms