RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SMARCE1Q969G3 411 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 PCYT2Q99447 389 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 C7orf25Q9BPX7 421 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 HMX1Q9NP08 348 aaPredicted RBP12.29□□□□□ -0.44
TMEM260-208ENST00000555905 ERAP1Q9NZ08 941 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 SEPT9Q9UHD8 586 aaPredicted RBP12.29□□□□□ -0.44
TMEM260-208ENST00000555905 DDX20Q9UHI6 824 aaKnown RBP12.29□□□□□ -0.44
TMEM260-208ENST00000555905 ZBTB39O15060 712 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 KPNA6O60684 536 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 C6orf222P0C671 652 aaPredicted RBP12.28□□□□□ -0.44
TMEM260-208ENST00000555905 MARK3P27448 753 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 GJA9P57773 515 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 DPYDQ12882 1025 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 PKN2Q16513 984 aaKnown RBP12.28□□□□□ -0.44
TMEM260-208ENST00000555905 XKR9Q5GH70 373 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 SASS6Q6UVJ0 657 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 RBM43Q6ZSC3 357 aaKnown RBP12.28□□□□□ -0.44
TMEM260-208ENST00000555905 TRIM50Q86XT4 487 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 SH3TC2Q8TF17 1288 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
TMEM260-208ENST00000555905 CCDC47Q96A33 483 aaKnown RBP12.28□□□□□ -0.44
TMEM260-208ENST00000555905 CEP170P1Q96L14 293 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 MTRQ99707 1265 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 UPF3AQ9H1J1 476 aaKnown RBP12.28□□□□□ -0.44
TMEM260-208ENST00000555905 BLZF1Q9H2G9 400 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 XPNPEP3Q9NQH7 507 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 KCND2Q9NZV8 630 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 KIAA1468Q9P260 1216 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 SYNRGQ9UMZ2 1314 aa12.28□□□□□ -0.44
TMEM260-208ENST00000555905 ARID2Q68CP9 1835 aa12.27□□□□□ -0.44
TMEM260-208ENST00000555905 SYCE3A1L190 88 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 MYMKA6NI61 221 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 MYL3P08590 195 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 ZNF286BP0CG31 522 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 CYP11B2P19099 503 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 RARRES1P49788 294 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 ASIC1P78348 528 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 CUL4BQ13620 913 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 GNASQ5JWF2 1037 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 PLA2G4FQ68DD2 849 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 CNNM4Q6P4Q7 775 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 PADI6Q6TGC4 694 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 ANO5Q75V66 913 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 ATP8B4Q8TF62 1192 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 DDX12PQ92771 950 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 ERCC4Q92889 916 aaPredicted RBP12.27□□□□□ -0.45
TMEM260-208ENST00000555905 GSDMAQ96QA5 445 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 NIFKQ9BYG3 293 aaKnown RBP12.27□□□□□ -0.45
TMEM260-208ENST00000555905 TRIM9Q9C026 710 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 CYP26B1Q9NR63 512 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 RMND1Q9NWS8 449 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 PPME1Q9Y570 386 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 PCDHA5Q9Y5H7 936 aa12.27□□□□□ -0.45
TMEM260-208ENST00000555905 TMEM150BA6NC51 233 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 H3BRB1 525 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 HBP1O60381 514 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 STBD1O95210 358 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 PGK1P00558 417 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 RPN1P04843 607 aaKnown RBP12.26□□□□□ -0.45
TMEM260-208ENST00000555905 ATP4AP20648 1035 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 CASP1P29466 404 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 NPEPPSP55786 919 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 NKX3-2P78367 333 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 BEX3Q00994 111 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 PLCB4Q15147 1175 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 MTERF2Q49AM1 385 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 RINT1Q6NUQ1 792 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 FBXO46Q6PJ61 603 aaPredicted RBP12.26□□□□□ -0.45
TMEM260-208ENST00000555905 DYMQ7RTS9 669 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 RNF180Q86T96 592 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 EXOC8Q8IYI6 725 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 C16orf70Q9BSU1 422 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 RUSC1Q9BVN2 902 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 TIPINQ9BVW5 301 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 KATNAL1Q9BW62 490 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 TUT1Q9H6E5 874 aaKnown RBP12.26□□□□□ -0.45
TMEM260-208ENST00000555905 PCDHB13Q9Y5F0 798 aa12.26□□□□□ -0.45
TMEM260-208ENST00000555905 PVALEFA0A1B0GWK0 134 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 USO1O60763 962 aaKnown RBP12.25□□□□□ -0.45
TMEM260-208ENST00000555905 TBCAO75347 108 aaKnown RBP12.25□□□□□ -0.45
TMEM260-208ENST00000555905 DGAT1O75907 488 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 CCDC192P0DO97 292 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 IDEP14735 1019 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 GUCY2CP25092 1073 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 RFC5P40937 340 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 SARSP49591 514 aaKnown RBP12.25□□□□□ -0.45
TMEM260-208ENST00000555905 RAD51AP2Q09MP3 1159 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 ARSHQ5FYA8 562 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 NT5DC1Q5TFE4 455 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 C1orf186Q6ZWK4 172 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 UNC13DQ70J99 1090 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 CCDC65Q8IXS2 484 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 TRIML1Q8N9V2 468 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 PCSK9Q8NBP7 692 aaKnown RBP12.25□□□□□ -0.45
TMEM260-208ENST00000555905 SPATA20Q8TB22 786 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 GTPBP4Q9BZE4 634 aaKnown RBP12.25□□□□□ -0.45
TMEM260-208ENST00000555905 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.25□□□□□ -0.45
TMEM260-208ENST00000555905 EXOC1Q9NV70 894 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 TUBE1Q9UJT0 475 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms