RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SRPRBQ9Y5M8 271 aaKnown RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 CSADQ9Y600 493 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 CFAP46Q8IYW2 2715 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 CHD7Q9P2D1 2997 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 TENM4Q6N022 2769 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 SMCO2A6NFE2 343 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 TCP10L2B9ZVM9 353 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 STXBP3O00186 592 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 NDUFB5O43674 189 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 CYTH3O43739 400 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 P4HBP07237 508 aaKnown RBP7.7□□□□□ -1.18
SLIRP-204ENST00000555890 CYP2C8P10632 490 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 EEF2P13639 858 aaKnown RBP7.7□□□□□ -1.18
SLIRP-204ENST00000555890 IL9P15248 144 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 ATXN1P54253 815 aaKnown RBP7.7□□□□□ -1.18
SLIRP-204ENST00000555890 EPHB4P54760 987 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 PPATQ06203 517 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 ZNF543Q08ER8 600 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 STX1AQ16623 288 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 CCDC96Q2M329 555 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 LEXMQ3ZCV2 418 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 NAALADL2Q58DX5 795 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 SLFN13Q68D06 897 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 WWC2Q6AWC2 1192 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 KANK3Q6NY19 840 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 SHC4Q6S5L8 630 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 PIK3AP1Q6ZUJ8 805 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 KRT25Q7Z3Z0 450 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 FAM83AQ86UY5 434 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 HOMER1Q86YM7 354 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 ELOA2Q8IYF1 753 aaPredicted RBP7.7□□□□□ -1.18
SLIRP-204ENST00000555890 CITED4Q96RK1 184 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 PIGSQ96S52 555 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 SENP6Q9GZR1 1112 aaPredicted RBP7.7□□□□□ -1.18
SLIRP-204ENST00000555890 NAT10Q9H0A0 1025 aaKnown RBP7.7□□□□□ -1.18
SLIRP-204ENST00000555890 ZMYND12Q9H0C1 365 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.7□□□□□ -1.186e-11■■■■■ 34.8
SLIRP-204ENST00000555890 ANO10Q9NW15 660 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 FBXO2Q9UK22 296 aaPredicted RBP7.7□□□□□ -1.18
SLIRP-204ENST00000555890 ANGPTL2Q9UKU9 493 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 KCNH3Q9ULD8 1083 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 SYNPO2Q9UMS6 1093 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 PCDHB6Q9Y5E3 794 aa7.7□□□□□ -1.18
SLIRP-204ENST00000555890 FRMPD2Q68DX3 1309 aaPredicted RBP7.7□□□□□ -1.18
SLIRP-204ENST00000555890 CEP295Q9C0D2 2601 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 PNMA6FA0A0J9YX94 578 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 ESYT2A0FGR8 921 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 GRXCR1A8MXD5 290 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 SCAMP3O14828 347 aaKnown RBP7.69□□□□□ -1.18
SLIRP-204ENST00000555890 BACH1O14867 736 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 SLC1A4P43007 532 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 RTP1P59025 263 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 ICA1Q05084 483 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 MRPL58Q14197 206 aaKnown RBP7.69□□□□□ -1.18
SLIRP-204ENST00000555890 SEPT2Q15019 361 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 ZNF174Q15697 407 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 NPY5RQ15761 445 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 ANO6Q4KMQ2 910 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 PPP1R18Q6NYC8 613 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 TMC7Q7Z402 723 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 GMCL1P1Q8NEA9 526 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 UBXN4Q92575 508 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 CLIC6Q96NY7 704 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 PYM1Q9BRP8 204 aaKnown RBP7.69□□□□□ -1.18
SLIRP-204ENST00000555890 UBA5Q9GZZ9 404 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 GLT8D2Q9H1C3 349 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 DNAJC18Q9H819 358 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 ARHGEF10LQ9HCE6 1279 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 USP25Q9UHP3 1055 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 GJD2Q9UKL4 321 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 PCDHA6Q9UN73 950 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 HPSEQ9Y251 543 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 PCDHA8Q9Y5H6 950 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 MRVI1Q9Y6F6 885 aa7.69□□□□□ -1.18
SLIRP-204ENST00000555890 PLXNB2O15031 1838 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 ITPR1Q14643 2758 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 SPTA1P02549 2419 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 GOLGA6L19H0YKK7 550 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 LAD1O00515 517 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 TREHO43280 583 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 GH2P01242 217 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 ERCC5P28715 1186 aaPredicted RBP7.68□□□□□ -1.18
SLIRP-204ENST00000555890 INPP5BP32019 993 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 ZNF165P49910 485 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 ADCY7P51828 1080 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 MRPL12P52815 198 aaKnown RBP7.68□□□□□ -1.18
SLIRP-204ENST00000555890 ATP2C1P98194 919 aaPredicted RBP7.68□□□□□ -1.18
SLIRP-204ENST00000555890 TRAF1Q13077 416 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 ORC2Q13416 577 aaPredicted RBP7.68□□□□□ -1.18
SLIRP-204ENST00000555890 TNFAIP1Q13829 316 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 NONOQ15233 471 aaKnown RBP eCLIP7.68□□□□□ -1.18
SLIRP-204ENST00000555890 SLC35G1Q2M3R5 365 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 ARL6IP4Q66PJ3 421 aaKnown RBP7.68□□□□□ -1.18
SLIRP-204ENST00000555890 KRBA2Q6ZNG9 492 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 CLEC10AQ8IUN9 316 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 CEP57L1Q8IYX8 460 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 ADGRF4Q8IZF3 695 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 CNNM3Q8NE01 707 aa7.68□□□□□ -1.18
SLIRP-204ENST00000555890 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.68□□□□□ -1.18
SLIRP-204ENST00000555890 SCG3Q8WXD2 468 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms