RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	PTGDR	Q13258	359 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	PPP2R5C	Q13362	524 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	LAMC2	Q13753	1193 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	CALCRL	Q16602	461 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	PRR16	Q569H4	304 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	KCTD17	Q8N5Z5	321 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	LINC00301	Q8NCQ3	95 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	CYP2W1	Q8TAV3	490 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	KCNG4	Q8TDN1	519 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	HAS1	Q92839	578 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	PHOX2B	Q99453	314 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	LOXHD1	Q8IVV2	1947 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	DCX	O43602	365 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	NBN	O60934	754 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	ATG7	O95352	703 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	OR52Z1	P0C646	297 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	AR	P10275	920 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	TXN	P10599	105 aa	Known RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	ALAD	P13716	330 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	SFN	P31947	248 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	MCM7	P33993	719 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	CPT1A	P50416	773 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	KRT76	Q01546	638 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	SF3A1	Q15459	793 aa	Known RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	CELF3	Q5SZQ8	465 aa	Known RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	METTL7B	Q6UX53	244 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	HFE2	Q6ZVN8	426 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	SESTD1	Q86VW0	696 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	ZNF579	Q8NAF0	562 aa	Known RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	SP7	Q8TDD2	431 aa	Predicted RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	AFAP1L1	Q8TED9	768 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	AK8	Q96MA6	479 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	TGS1	Q96RS0	853 aa	Known RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	USP28	Q96RU2	1077 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	SDF4	Q9BRK5	362 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	ZNF577	Q9BSK1	485 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	RAB34	Q9BZG1	259 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	ALG13	Q9NP73	1137 aa	Known RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	PCDHA12	Q9UN75	941 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	MRVI1	Q9Y6F6	885 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	DOCK5	Q9H7D0	1870 aa		10.82	□□□□□ -0.68
PRKCH-215	ENST00000555382	KMT2E	Q8IZD2	1858 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	KPNA6	O60684	536 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	PPFIA4	O75335	1185 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	GH1	P01241	217 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	MYL3	P08590	195 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	MUT	P22033	750 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	UBA1	P22314	1058 aa	Known RBP	10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	SP2	Q02086	613 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	SPIRE1	Q08AE8	756 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	BFSP2	Q13515	415 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	MBTPS1	Q14703	1052 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	ZNF174	Q15697	407 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	CSPP1	Q1MSJ5	1256 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	TRIM71	Q2Q1W2	868 aa	Known RBP	10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	LRCH2	Q5VUJ6	765 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	SEPT14	Q6ZU15	432 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	POTED	Q86YR6	584 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	IGSF22	Q8N9C0	903 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	TMEM87A	Q8NBN3	555 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	PPTC7	Q8NI37	304 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	CAGE1	Q8TC20	777 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	KAT2B	Q92831	832 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	RAD9A	Q99638	391 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	TMEM60	Q9H2L4	133 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	TTC12	Q9H892	705 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	JPH1	Q9HDC5	661 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	VAV3	Q9UKW4	847 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	SRPRB	Q9Y5M8	271 aa	Known RBP	10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	CLIC4	Q9Y696	253 aa		10.81	□□□□□ -0.68
PRKCH-215	ENST00000555382	WDR87	Q6ZQQ6	2873 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	IGKV6D-21	A0A0A0MT36	114 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	SPTLC2	O15270	562 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	GAS7	O60861	476 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	ATP9A	O75110	1047 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	ARIH2	O95376	493 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	SELP	P16109	830 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	LONP1	P36776	959 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	JAK3	P52333	1124 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	HTRA4	P83105	476 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	DNM1	Q05193	864 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	ARHGAP1	Q07960	439 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	ITGB3BP	Q13352	177 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	TMEM266	Q2M3C6	531 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	GDF6	Q6KF10	455 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	FAM173B	Q6P4H8	233 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	CNKSR3	Q6P9H4	555 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	DTHD1	Q6ZMT9	781 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	KRI1	Q8N9T8	703 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	OR6J1	Q8NGC5	347 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	COPS5	Q92905	334 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	TNPO1	Q92973	898 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	WNT8B	Q93098	351 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	C17orf80	Q9BSJ5	609 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	TEKT3	Q9BXF9	490 aa		10.8	□□□□□ -0.68
PRKCH-215	ENST00000555382	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.8	□□□□□ -0.68

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