RNA–Protein interactions for RNA: ENST00000555306.5

APEX1-209, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 898 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-209ENST00000555306 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.27
APEX1-209ENST00000555306 TUT1Q9H6E5 874 aaKnown RBP13.36□□□□□ -0.27
APEX1-209ENST00000555306 PAK6Q9NQU5 681 aaPredicted RBP13.36□□□□□ -0.27
APEX1-209ENST00000555306 PDLIM7Q9NR12 457 aa13.36□□□□□ -0.27
APEX1-209ENST00000555306 ARHGEF35A5YM69 484 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 GAS2O43903 313 aaKnown RBP13.35□□□□□ -0.27
APEX1-209ENST00000555306 SORBS3O60504 671 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 DGAT1O75907 488 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 CABYRO75952 493 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 C6orf222P0C671 652 aaPredicted RBP13.35□□□□□ -0.27
APEX1-209ENST00000555306 RFC5P40937 340 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 KCNB1Q14721 858 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 ARSHQ5FYA8 562 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 GNASQ5JWF2 1037 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 RNF180Q86T96 592 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 ARRDC4Q8NCT1 418 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 DNAJC19Q96DA6 116 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 JPH2Q9BR39 696 aaPredicted RBP13.35□□□□□ -0.27
APEX1-209ENST00000555306 SEZ6LQ9BYH1 1024 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 CYP26B1Q9NR63 512 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 ODF2LQ9ULJ1 636 aa13.35□□□□□ -0.27
APEX1-209ENST00000555306 MYH11P35749 1972 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 FRMD3A2A2Y4 597 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 MOXD2PA6NHM9 499 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 MYMKA6NI61 221 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 RRN3P2A6NIE6 340 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 ZBTB39O15060 712 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 PTGS1P23219 599 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 AFMP43652 599 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 PURAQ00577 322 aaKnown RBP13.34□□□□□ -0.27
APEX1-209ENST00000555306 XKR9Q5GH70 373 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 PADI6Q6TGC4 694 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 GPBP1Q86WP2 473 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 MCPH1Q8NEM0 835 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 SH3TC2Q8TF17 1288 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 DDX12PQ92771 950 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 KAT2BQ92831 832 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 SMARCE1Q969G3 411 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 CCDC47Q96A33 483 aaKnown RBP13.34□□□□□ -0.27
APEX1-209ENST00000555306 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 CCDC43Q96MW1 224 aaKnown RBP13.34□□□□□ -0.27
APEX1-209ENST00000555306 MTG1Q9BT17 334 aaPredicted RBP13.34□□□□□ -0.27
APEX1-209ENST00000555306 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
APEX1-209ENST00000555306 RMND1Q9NWS8 449 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 KCNG1Q9UIX4 513 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 PCDHA5Q9Y5H7 936 aa13.34□□□□□ -0.27
APEX1-209ENST00000555306 IGKV6-21A0A0C4DH24 114 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 MAGEB2O15479 319 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 KLRC4O43908 158 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 MAFO75444 373 aaPredicted RBP13.33□□□□□ -0.28
APEX1-209ENST00000555306 RTP1P59025 263 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 PSMD2Q13200 908 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 PNOCQ13519 176 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 CUL4BQ13620 913 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 GIT2Q14161 759 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 LRRC41Q15345 812 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 CAMK4Q16566 473 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 ZSCAN23Q3MJ62 389 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 UNC13DQ70J99 1090 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 TRIM50Q86XT4 487 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 LENG1Q96BZ8 264 aaPredicted RBP13.33□□□□□ -0.28
APEX1-209ENST00000555306 ZNF333Q96JL9 665 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 UNC93B1Q9H1C4 597 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 RNPEPQ9H4A4 650 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 C17orf75Q9HAS0 396 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 SEL1LQ9UBV2 794 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
APEX1-209ENST00000555306 OGDHLQ9ULD0 1010 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 NRCAMQ92823 1304 aa13.33□□□□□ -0.28
APEX1-209ENST00000555306 A0A087WWV3 80 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 ZBTB42B2RXF5 422 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 RHOBTB3O94955 611 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 PGK1P00558 417 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 RPN1P04843 607 aaKnown RBP13.32□□□□□ -0.28
APEX1-209ENST00000555306 SSBP05455 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
APEX1-209ENST00000555306 ZNF286BP0CG31 522 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 CCL5P13501 91 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 GAP43P17677 238 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 SCP2P22307 547 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 HOXC8P31273 242 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 PSEN2P49810 448 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 ZNF131P52739 623 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 NPEPPSP55786 919 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 ZNF445P59923 1031 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 BEX3Q00994 111 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 EHHADHQ08426 723 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 MFSD10Q14728 455 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 CT47A1Q5JQC4 288 aaPredicted RBP13.32□□□□□ -0.28
APEX1-209ENST00000555306 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 CCDC65Q8IXS2 484 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 GRAMD1CQ8IYS0 662 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 STAMQ92783 540 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 KIFAP3Q92845 792 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 KCNN1Q92952 543 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 RUSC1Q9BVN2 902 aa13.32□□□□□ -0.28
APEX1-209ENST00000555306 COL4A3BPQ9Y5P4 624 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms