RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 MAFGO15525 162 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 C8BP07358 591 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 ENPP1P22413 925 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 MC4RP32245 332 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 GPR3P46089 330 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 MOGSQ13724 837 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 PRAMEF9Q5VWM5 478 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 SLFN12LQ6IEE8 588 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 B3GNT8Q7Z7M8 397 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 PNMA8AQ86V59 439 aaPredicted RBP7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 LDHDQ86WU2 507 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 PROSER1Q86XN7 944 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 FAM26EQ8N5C1 309 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 WDR48Q8TAF3 677 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 DIRC2Q96SL1 478 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 MYL10Q9BUA6 226 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 LUC7LQ9NQ29 371 aaKnown RBP7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 DLL4Q9NR61 685 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 PLA2G2DQ9UNK4 145 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 FAN1Q9Y2M0 1017 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 NFIBO00712 420 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 TSPAN6O43657 245 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 SEMA7AO75326 666 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 PRPF6O94906 941 aaKnown RBP7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 APOL3O95236 402 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 MPIG6BO95866 241 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 RECQLP46063 649 aaPredicted RBP7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 MANFP55145 182 aaKnown RBP7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 SKIDA1Q1XH10 827 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 KIAA1841Q6NSI8 718 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 CMIPQ8IY22 773 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 SSH1Q8WYL5 1049 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 CDH19Q9H159 772 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 SEMA4AQ9H3S1 761 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 CNTD2Q9H8S5 307 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 CCM2LQ9NUG4 571 aaPredicted RBP7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 GALNT8Q9NY28 637 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 ZIM2Q9NZV7 527 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 LUC7L2Q9Y383 392 aaKnown RBP7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 PCDHA5Q9Y5H7 936 aa7.19□□□□□ -1.26
CKS1BP1-201ENST00000555221 CARMIL2Q6F5E8 1435 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 KLHL33A6NCF5 533 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 FZD9O00144 591 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 MTHFD2P13995 350 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 ECE1P42892 770 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 BCAR1P56945 870 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 ADCY2Q08462 1091 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 MYBPC3Q14896 1274 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 CLUL1Q15846 466 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 UGT8Q16880 541 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 TMC5Q6UXY8 1006 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 LIPIQ6XZB0 460 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 NOL8Q76FK4 1167 aaKnown RBP7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 KANSL1Q7Z3B3 1105 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 CHPFQ8IZ52 775 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 DTX3Q8N9I9 347 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 SMARCC2Q8TAQ2 1214 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 MZB1Q8WU39 189 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 TGFBRAP1Q8WUH2 860 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 RPGRQ92834 1020 aaKnown RBP7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 RAX2Q96IS3 184 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 CCDC136Q96JN2 1154 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 WRNIP1Q96S55 665 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 BTBD2Q9BX70 525 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 ANO3Q9BYT9 981 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 TCF7L1Q9HCS4 588 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 DNAJC28Q9NX36 388 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 ARHGAP20Q9P2F6 1191 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 MBD1Q9UIS9 605 aaPredicted RBP7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 ZNF180Q9UJW8 692 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 PPP2R3BQ9Y5P8 575 aa7.18□□□□□ -1.26
CKS1BP1-201ENST00000555221 MYOCOSA0A1B0GUC4 107 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 LRRC10BA6NIK2 292 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 ELL2O00472 640 aaPredicted RBP7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 XPOTO43592 962 aaKnown RBP7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 H2AFYO75367 372 aaKnown RBP7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 ABLIM3O94929 683 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 SCGB1D2O95969 90 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 CT47B1P0C2W7 299 aaPredicted RBP7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 APEX1P27695 318 aaKnown RBP7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 MC3RP41968 323 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 CDR1P51861 262 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 PCBP2Q15366 365 aaKnown RBP eCLIP7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 TMEM240Q5SV17 173 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 CCDC62Q6P9F0 684 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 DPP8Q6V1X1 898 aaPredicted RBP7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 PRR23BQ6ZRT6 265 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 RSAD2Q8WXG1 361 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 CLIC6Q96NY7 704 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 AMNQ9BXJ7 453 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 PCGF6Q9BYE7 350 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 MCOLN1Q9GZU1 580 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 RBPJLQ9UBG7 517 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 NUMBLQ9Y6R0 609 aa7.17□□□□□ -1.26
CKS1BP1-201ENST00000555221 PRSS38A1L453 326 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 N4BP3O15049 544 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 RFPL1O75677 317 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 CLEC2LP0C7M8 214 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 ATF2P15336 505 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms