RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 SESTD1Q86VW0 696 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 EXOC8Q8IYI6 725 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 FMR1NBQ8N0W7 255 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-215ENST00000554997 SYT2Q8N9I0 419 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-215ENST00000554997 SLC43A3Q8NBI5 491 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 CEP170P1Q96L14 293 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 CEP89Q96ST8 783 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 GOLPH3LQ9H4A5 285 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 STARD7Q9NQZ5 370 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 CYP26B1Q9NR63 512 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 BLOC1S4Q9NUP1 217 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 STK17AQ9UEE5 414 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 TRPC6Q9Y210 931 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 ZBTB42B2RXF5 422 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 MAGEB2O15479 319 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 SLFN14P0C7P3 912 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 PLA2G4BP0C869 781 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 SMIM10L2AP0DMW4 78 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 SMIM10L2BP0DMW5 78 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 GNAT1P11488 350 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 EN2P19622 333 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-215ENST00000554997 RARRES1P49788 294 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 CDK7P50613 346 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 NPEPPSP55786 919 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 CHMP4BP1P59074 171 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 ADAM17P78536 824 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 XKR9Q5GH70 373 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 MARCH8Q5T0T0 291 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 C1orf53Q5VUE5 145 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 SLC39A5Q6ZMH5 540 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 SV2BQ7L1I2 683 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 ELOA2Q8IYF1 753 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-215ENST00000554997 LRRC15Q8TF66 581 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 RAD54LQ92698 747 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 DHX58Q96C10 678 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 TIGD1Q96MW7 591 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 LRRC27Q9C0I9 530 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 SENP6Q9GZR1 1112 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-215ENST00000554997 BHMT2Q9H2M3 363 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 PDLIM7Q9NR12 457 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 HDAC6Q9UBN7 1215 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 COL1A2P08123 1366 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 MYH15Q9Y2K3 1946 aa11.37□□□□□ -0.59
SYNE2-215ENST00000554997 A0A0U1RQG5 324 aaPredicted RBP11.36□□□□□ -0.59
SYNE2-215ENST00000554997 C17orf102A2RUQ5 167 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 TMEM150BA6NC51 233 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 ARVCFO00192 962 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 DGAT1O75907 488 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 LIG1P18858 919 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 PTMSP20962 102 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 KLRC1P26715 233 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 HOXC8P31273 242 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 RFC5P40937 340 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 SLC12A3P55017 1021 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 AMPD3Q01432 767 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 PPFIA1Q13136 1202 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 MCM6Q14566 821 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 GRIK4Q16099 956 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 KANK3Q6NY19 840 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 PADI6Q6TGC4 694 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 C1orf186Q6ZWK4 172 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 NECAB2Q7Z6G3 386 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 CEP57L1Q8IYX8 460 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 LARP4BQ92615 738 aaKnown RBP11.36□□□□□ -0.59
SYNE2-215ENST00000554997 PAWRQ96IZ0 340 aaKnown RBP11.36□□□□□ -0.59
SYNE2-215ENST00000554997 C11orf49Q9H6J7 331 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 MAGEF1Q9HAY2 307 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 KBTBD4Q9NVX7 518 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 KCND2Q9NZV8 630 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 SEPT9Q9UHD8 586 aaPredicted RBP11.36□□□□□ -0.59
SYNE2-215ENST00000554997 GTF2IRD1Q9UHL9 959 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 SERTAD1Q9UHV2 236 aa11.36□□□□□ -0.59
SYNE2-215ENST00000554997 IGKV6-21A0A0C4DH24 114 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 MBLAC1A4D2B0 266 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-215ENST00000554997 ARHGEF35A5YM69 484 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 ACTN4O43707 911 aaKnown RBP11.35□□□□□ -0.59
SYNE2-215ENST00000554997 MAFO75444 373 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-215ENST00000554997 NR1I2O75469 434 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 CYP11B2P19099 503 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 HIC1Q14526 733 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 MTERF2Q49AM1 385 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 ARSHQ5FYA8 562 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 PLA2G4FQ68DD2 849 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 RINT1Q6NUQ1 792 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 MTHFD1LQ6UB35 978 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 KRBA2Q6ZNG9 492 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 UBE2Q1Q7Z7E8 422 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 CNNM3Q8NE01 707 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 PAGE5Q96GU1 130 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 CCDC34Q96HJ3 373 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 JPH2Q9BR39 696 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-215ENST00000554997 SH2D3AQ9BRG2 576 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 TNMDQ9H2S6 317 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 DHX33Q9H6R0 707 aaKnown RBP11.35□□□□□ -0.59
SYNE2-215ENST00000554997 BMP2KQ9NSY1 1161 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-215ENST00000554997 PCDHA2Q9Y5H9 948 aa11.35□□□□□ -0.59
SYNE2-215ENST00000554997 KIAA0100Q14667 2235 aaKnown RBP11.34□□□□□ -0.59
SYNE2-215ENST00000554997 C22orf31O95567 290 aa11.34□□□□□ -0.59
SYNE2-215ENST00000554997 SSBP05455 408 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms